clustering bug

[wdb-web]

When I use the following code:
adata.var_names_make_unique()
model = GraphST.GraphST(adata=adata, device='cpu')
adata = model.train()
radius = 50
n_clusters = 7
tool = 'leiden'
clustering(adata, n_clusters, radius=radius, method=tool, start=0.1, end=2.0, increment=0.01, refinement=False)
I get the following error:
self._partition = _c_leiden._new_RBConfigurationVertexPartition(pygraph_t,
BaseException: Could not construct partition: Weight vector not the same size as the number of edges.

[longyahui]

Hi,

Thank you for your questions.

It seems it is the issue of inconsistent dimention. Could you help provide more details about the input adata.h5ad?

Best regards,
Yahui