Pinned Repositories
bg-atlasgen
Scripts to package BrainGlobe atlases
brainreg
Fork to fix GitHub issues for Brainglobe's brainreg repository
cornel-ml-course
datashuttle
A place to submit conda recipes before they become fully fledged conda-forge feedstocks
DVARS
Insight & Inference for DVARS: 3-part variance decomposition, gives units & p-values to DVARS measures as well as spatiotemporal rs-fMRI diagnostic.
ephysworking
General scripts for ephys
learing_algebra_cpp_tutorial
Following the Linear Algebra in C++ course at https://www.youtube.com/playlist?list=PL3WoIG-PLjSv9vFx2dg0BqzDZH_6qzF8-
pyftpsync
Synchronize directories using FTP(S), SFTP, or file system access. - Forked to provide access to private key argument in pystfp.Connection
JoeZiminski's Repositories
JoeZiminski/learing_algebra_cpp_tutorial
Following the Linear Algebra in C++ course at https://www.youtube.com/playlist?list=PL3WoIG-PLjSv9vFx2dg0BqzDZH_6qzF8-
JoeZiminski/pyftpsync
Synchronize directories using FTP(S), SFTP, or file system access. - Forked to provide access to private key argument in pystfp.Connection
JoeZiminski/bg-atlasgen
Scripts to package BrainGlobe atlases
JoeZiminski/brainreg
Fork to fix GitHub issues for Brainglobe's brainreg repository
JoeZiminski/cornel-ml-course
JoeZiminski/datashuttle
A place to submit conda recipes before they become fully fledged conda-forge feedstocks
JoeZiminski/DVARS
Insight & Inference for DVARS: 3-part variance decomposition, gives units & p-values to DVARS measures as well as spatiotemporal rs-fMRI diagnostic.
JoeZiminski/ephysworking
General scripts for ephys
JoeZiminski/example-ephys-pipelines
Example pipelines for extracellular electrophysiology analysis with SpikeInterface
JoeZiminski/fancylog
Fancier logging with python.
JoeZiminski/git-example
NIU team meeting on clean git history
JoeZiminski/hello-world
test cookiecutter
JoeZiminski/ibl-neuropixel
Collection of tools to handle Neuropixel 1.0 and 2.0 data
JoeZiminski/jax_playing
playing with jax
JoeZiminski/linear_modelling_and_estimation_examples
Walkthroughs for linear modelling and estimation e.g. ANOVA, MLE
JoeZiminski/mri_project_manager
Tool for automated MRI scan download from HPC, organise into BIDS, run analysis
JoeZiminski/mri_tools
Tools for the analysis of MRI (fMRI, anatomical) data
JoeZiminski/isosplit6
Isosplit clustering
JoeZiminski/Kilosort_2-5_nowhiten
Fast spike sorting with drift correction for up to a thousand channels
JoeZiminski/numpyro_playing
JoeZiminski/phylib
Lightweight electrophysiological data analysis library
JoeZiminski/python-neo
Neo is a package for representing electrophysiology data in Python, together with support for reading a wide range of neurophysiology file formats
JoeZiminski/python-packaging-at-jz90
JoeZiminski/PyWaveSurfer
PyWaveSurfer is a Python package for reading WaveSurfer data files in Python.
JoeZiminski/robustcorrtool
robust correlation toolbox (a zipped distrib., same as here, @ https://sourceforge.net/projects/robustcorrtool/)
JoeZiminski/slides-akrami-lab-meeting-09042024
On NeuroBlueprint and datashuttle
JoeZiminski/SpikeGLX
SpikeGLX recording system GUI [Neuropixels NI]
JoeZiminski/spikeinterface
A Python-based module for creating flexible and robust spike sorting pipelines.
JoeZiminski/test_project
test
JoeZiminski/textual
The lean application framework for Python. Build sophisticated user interfaces with a simple Python API. Run your apps in the terminal and a web browser.