JohannesWiesner/csp_docker

Issues

• Download example data and put in /testing/data?

  #33 opened 2 years ago by JohannesWiesner
  1

• Install spyder an make this the default python IDE for the docker container

  #1 opened 3 years ago by JohannesWiesner
  5

• Improve -t and -y flags

  #34 opened 2 years ago by JohannesWiesner
  0

• Improve testing workflow

  #28 opened 2 years ago by JohannesWiesner
  3

• Newer linux distros do not include the multiarch-support package anymore

  #32 opened 2 years ago by JohannesWiesner
  0

• Newer versions of neuroimage software when using neurodocker flags instead of neurodebian apt-get?

  #17 opened 2 years ago by JohannesWiesner
  1

• Install nano

  #31 opened 2 years ago by JohannesWiesner
  0

• Update to latest version of tcy

  #26 opened 2 years ago by JohannesWiesner
  0

• Add CAT12

  #9 opened 2 years ago by JohannesWiesner
  2

• Octave doesn't work?

  #27 opened 2 years ago by JohannesWiesner
  1

• Update base-image

  #12 opened 2 years ago by JohannesWiesner
  5

• Add generic script to start container

  #6 opened 2 years ago by JohannesWiesner
  0

• Add MRICron or even better MRIcroGL

  #23 opened 2 years ago by JohannesWiesner
  0

• Conda environment should be already activated when starting the container

  #16 opened 2 years ago by JohannesWiesner
  9

• Add surf-ice

  #25 opened 2 years ago by JohannesWiesner
  0

• Add RStudio

  #24 opened 2 years ago by JohannesWiesner
  1

• Start with completely empty base environment

  #18 opened 2 years ago by JohannesWiesner
  4

• Improve jupyter-notebook and jupyterlab

  #2 opened 2 years ago by JohannesWiesner
  1

• Set standard workdir

  #14 opened 2 years ago by JohannesWiesner
  1

• Add FSL

  #22 opened 2 years ago by JohannesWiesner
  0

• Add ANTS

  #21 opened 2 years ago by JohannesWiesner
  0

• Add AFNI

  #20 opened 2 years ago by JohannesWiesner
  0

• Removing conda pkgs and cache can possibly also be done with conda clean command

  #7 opened 2 years ago by JohannesWiesner
  3

• Setting channel priority to strict is already done in the background

  #19 opened 2 years ago by JohannesWiesner
  1

• Add tcy as submodule so that conda environment inside container has all standard csp-packages

  #15 opened 2 years ago by JohannesWiesner
  0

• Remame generate_dockerfile to generate_image_files

  #5 opened 2 years ago by JohannesWiesner
  1

• Don't run jupyter-notebook by default

  #11 opened 2 years ago by JohannesWiesner
  1

• Switch to ReproNim/neurodocker

  #4 opened 2 years ago by JohannesWiesner
  1

• Add octave?

  #8 opened 2 years ago by JohannesWiesner
  1

• Create conda environment using .yml file and not using conda_install and pip_install

  #3 opened 2 years ago by JohannesWiesner
  2