Add option to remove low PLDDT residues from domain assignments on AlphaFold structures

Question

Add option to remove low PLDDT residues from domain assignments on AlphaFold structures

Opened this issue a year ago · 2 comments

Add some functionality to the post-processing which modifies domain assignments to remove residues which have low PLDDT (which is the b-factor column of PDB files generated by AlphaFold).

Answer 1 · 2023-10-16T15:33:57.000Z

I'm working on this currently

Answer 2 · 2023-10-17T21:40:56.000Z

in case of any use i did some refactoring to support this here (was intended for unidoc but also compatible with chainsaw): https://github.com/JudeWells/chainsaw/compare/unidoc