JudeWells/chainsaw

Issues

• Allow for chain identifiers different from A

  #34 opened 4 months ago by JoanaMPereira
  2

• Add setup.py or equivalent to enable proper packaging and simplify interactive usage

  #22 opened 4 months ago by alex-hh
  1

• Reproducibility: Datasets required

  #33 opened 7 months ago by FoxHarley
  5

• Cluster warning

  #16 opened a year ago by alex-hh
  0

• Chainsaw Software Distribution License

  #32 opened a year ago by jlotthammer
  1

• Add chain specifier

  #23 opened a year ago by bordin89
  0

• Add option to remove low PLDDT residues from domain assignments on AlphaFold structures

  #29 opened a year ago by JudeWells
  2

• Residues with non-sequential index

  #30 opened a year ago by sillitoe
  0

• Output chopping by residue labels (as well as sequential numbering)

  #27 opened a year ago by sillitoe
  0

• Add default submission args to qsub scripts

  #14 opened a year ago by alex-hh
  0

• Submit script should loop around archive files

  #19 opened a year ago by sillitoe
  0

• Change zero-indexed output behaviour

  #17 opened a year ago by JudeWells
  1

• Remove hard-coded python environment variable in renum_pdb_file()

  #18 opened a year ago by JudeWells
  6

• optimise feature creation: especially function: calc_dist_matrix

  #6 opened a year ago by JudeWells
  0

• Zip extraction performance

  #15 opened 2 years ago by alex-hh
  4

• should output and save_dir arguments agree / share directory?

  #11 opened 2 years ago by alex-hh
  0

• Refactor inference_time_create_features() to be method of PairwisePredictor object

  #7 opened 2 years ago by JudeWells
  0