Pinned Repositories
abac
adaptive arithmetic coder
BitIO
UNSTABLE API!!! C library for buffered bit reading/writing, byte and bit order swapping, stream bit alignment, command line parsing, etc.
CABAC
Context Adaptive QM Coding
gencode-backmap
Mapping of GENCODE gene annotation set files to older assembies
kvazaar
An open-source HEVC encoder
trimmomatic
Read trimming tool for Illumina NGS data.
genie
Open Source MPEG-G Codec
Junaiid-Ahmad's Repositories
Junaiid-Ahmad/BitIO
UNSTABLE API!!! C library for buffered bit reading/writing, byte and bit order swapping, stream bit alignment, command line parsing, etc.
Junaiid-Ahmad/abac
adaptive arithmetic coder
Junaiid-Ahmad/CABAC
Context Adaptive QM Coding
Junaiid-Ahmad/gencode-backmap
Mapping of GENCODE gene annotation set files to older assembies
Junaiid-Ahmad/kvazaar
An open-source HEVC encoder
Junaiid-Ahmad/trimmomatic
Read trimming tool for Illumina NGS data.
Junaiid-Ahmad/aws-doc-sdk-examples
Welcome to the AWS Code Examples Repository. This repo contains code examples used in the AWS documentation, AWS SDK Developer Guides, and more. For more information, see the Readme.rst file below.
Junaiid-Ahmad/bwa
Burrow-Wheeler Aligner for short-read alignment (see minimap2 for long-read alignment)
Junaiid-Ahmad/ci-server-scripts
Scripts used on CI server (jenkins)
Junaiid-Ahmad/FaStore
FaStore - high-performance FASTQ files compressor
Junaiid-Ahmad/fermikit
De novo assembly based variant calling pipeline for Illumina short reads
Junaiid-Ahmad/free-programming-books
:books: Freely available programming books
Junaiid-Ahmad/ImageCodingResearchTools
Junaiid-Ahmad/libde265
Open h.265 video codec implementation.
Junaiid-Ahmad/libStatGen
Useful set of classes for creating statistical genetic programs.
Junaiid-Ahmad/miniasm
Ultrafast de novo assembly for long noisy reads (though having no consensus step)
Junaiid-Ahmad/minimap2
A versatile pairwise aligner for genomic and spliced nucleotide sequences
Junaiid-Ahmad/minio
High Performance, Kubernetes Native Object Storage
Junaiid-Ahmad/ORCOM
Overlapping Reads COmpression with Minimizers
Junaiid-Ahmad/pipes
Pipelines for expressive code on collections in C++
Junaiid-Ahmad/ppm-console-app
Prediction by Partial Matching implementation
Junaiid-Ahmad/s3-utils
Utilities and tools based around Amazon S3 to provide convenience APIs in a CLI
Junaiid-Ahmad/shrimp
SHRiMP is a software package for aligning genomic reads against a target genome.
Junaiid-Ahmad/spdlog
Fast C++ logging library.
Junaiid-Ahmad/udf_infusion
A MySQL functionality enhancement UDF
Junaiid-Ahmad/YUView
The Free and Open Source Cross Platform YUV Viewer with an advanced analytics toolset