KarlKaise

Pinned Repositories

stLearn
A novel machine learning pipeline to analyse spatial transcriptomics data
Language:Python180 6 15824
singleCellTK
Interactively analyze single cell genomic data
Language:R171 14 13074
SPREd
Language:Python10
ASCT
Automatic Single-cell Toolbox
Language:Julia70
chooseR
An R framework for choosing clustering parameters in scRNA-seq analysis pipelines
Language:R00
DeepLIIF
Deep Learning Inferred Multiplex ImmunoFluorescence for IHC Image Quantification (https://deepliif.org) [Nature Machine Intelligence'22, CVPR'22, MICCAI'23, Histopathology'23, MICCAI'24]
Language:Python151 6 1757
plotly.R
An interactive graphing library for R
Language:R2.5k 115 1.8k623
inClust_plus
Language:Python01

KarlKaise/chooseR
An R framework for choosing clustering parameters in scRNA-seq analysis pipelines
Language:R00