Pinned Repositories
Bayesian-evidence-synthesis-for-influenza-burden
Use a Bayesian evidence synthesis approach to influenza burden estimation, using hospital surveillance data.
cdccovidview
đ·Weekly Surveillance Summary of U.S. COVID-19 Activity
coarseDataTools
An R package for analyzing censored and under-reported surveillance data.
COVID-19
COVID-19-maps
Maps of Covid-19 cases
COVID-19-Surveillance-Dashboard
Worked with Dr. Timothy Wiemken and Dr. Chris Prener from Saint Louis University to develop a Shiny application for COVID-19. Highlights include: anomaly and breakout detection, GIS tabs displaying health data in Missouri, and the ability to upload your own data to be analyzed.
COVID-19_ML
Predictive model for the COVID-19 outbreak
COVID19_surveillance_sensitivity
covid_law
COVID-19 mortality and demographic mortality laws
r-bridge-install
Install the R ArcGIS Tools
Kiki1017's Repositories
Kiki1017/r-bridge-install
Install the R ArcGIS Tools
Kiki1017/cdccovidview
đ·Weekly Surveillance Summary of U.S. COVID-19 Activity
Kiki1017/COVID-19
Kiki1017/COVID-19-Surveillance-Dashboard
Worked with Dr. Timothy Wiemken and Dr. Chris Prener from Saint Louis University to develop a Shiny application for COVID-19. Highlights include: anomaly and breakout detection, GIS tabs displaying health data in Missouri, and the ability to upload your own data to be analyzed.
Kiki1017/COVID-19_ML
Predictive model for the COVID-19 outbreak
Kiki1017/COVID19_surveillance_sensitivity
Kiki1017/covid_spatial
A Bayesian Approach to Improving Spatial Estimates After Accounting for Misclassification Bias in Surveillance Data for COVID-19 in Philadelphia, PA.
Kiki1017/covid_surveillance_strategy
Kiki1017/EcdcColors
Development of an R package for using colour palettes following March 2018 ECDC guidelines for presentation of surveillance data
Kiki1017/epidemiar
R package with modeling, forecasting, and early detection & early warning alerts code for EPIDEMIA forecasting reports. The Epidemic Prognosis Incorporating Disease and Environmental Monitoring for Integrated Assessment (EPIDEMIA) Forecasting System is a set of tools coded in free, open-access software, that integrate surveillance and environmental data to model and create short-term forecasts for environmentally-mediated diseases. For producing formatted reports, see also the demo project based on malaria in Ethiopia (with demo data): https://github.com/EcoGRAPH/epidemiar-demo
Kiki1017/epidemiar-demo
Demo R project to be used with package epidemiar for environmentally mediated disease modeling and forecasting, integrating data from epidemiological surveillance & environmental drivers. Demo is for malaria in Amhara region, Ethiopia. Epidemiological data are artificial and should not be used for research or public health. Find epidemiar here: https://github.com/EcoGRAPH/epidemiar
Kiki1017/FluView
Computational surveillance of pneumonia and influenza mortality in FluView uses epidemic thresholds to identify high mortality rates but is limited by statistical issues such as seasonality and autocorrelation. We utilized time series anomaly detection to improve recognition of high mortality rates. Results suggest anomaly detection may complement mortality reporting. Constructed with assistance from Dr. Timothy Wiemken from Saint Louis University.
Kiki1017/forem
For empowering community đ±
Kiki1017/freedom
An R package to calculate probability of freedom from disease in a population based on surveillance data
Kiki1017/Guatemala
Environmental Surveillance Results for PPLB
Kiki1017/injurymatrix
A R package for the implementation of ICD-10-CM injury matrix
Kiki1017/MachineLearningLab
Some experiments about Machine Learning
Kiki1017/mds
Medical Devices Surveillance
Kiki1017/mds-1
:exclamation: This is a read-only mirror of the CRAN R package repository. mds â Medical Devices Surveillance
Kiki1017/mixed_surveillance
Research projet on epidemiological surveillance using mixed model
Kiki1017/nbPaper2
Code to run the simulations of using the NB transmission method to estimate the generation/serial interval and applying it to TB surveillance data from Massachusetts (Leavitt et al. ????).
Kiki1017/o2geosocial
Transmission chain reconstruction using routinely-collected surveillance data
Kiki1017/Python-100-Days
Python - 100怩ä»æ°æć°ć€§ćž
Kiki1017/r-spatial.org
r-spatial.org blog sources
Kiki1017/surveillance-1
Read-only mirror of "surveillance" from r-forge SVN.
Kiki1017/surveillanceExt
Kiki1017/syndromic
syndromic definitions for injury surveillance
Kiki1017/teaching
Lectures and tutorials for number of courses in economics and statistics.
Kiki1017/trendbreaker
Auto surveillance for count data WIP
Kiki1017/UNICEF-political-rule-civic-order
2020 report on the state of political rule and civil society among selected Asia Pacific countries