Knowledge-Graph-Hub/automate-pheno-comparisons

Issues

• Populate `ancestor_label`

  #35 opened 6 months ago by caufieldjh
  0

• Produce log for overall build process

  #30 opened 8 months ago by caufieldjh
  3

• Remove stage `Run similarity for HP vs HP through HP alone`

  #32 opened 6 months ago by caufieldjh
  0

• Store output similarity tables on alternative, public location

  #33 opened 6 months ago by caufieldjh
  0

• Determine whether PHENIO edges are necessary in calculating HP vs HP semsim

  #31 opened 6 months ago by caufieldjh
  4

• Another file path issue: HP vs ZP is using incorrect path for joined table output

  #28 opened 8 months ago by caufieldjh
  0

• Another file path issue: HP vs MP can't find HP termset TSV

  #26 opened 8 months ago by caufieldjh
  0

• Call to s3cmd fails with "nothing to upload"

  #24 opened 8 months ago by caufieldjh
  0

• Jenkins string replacement and parsing errors

  #21 opened 8 months ago by caufieldjh
  3

• Call to duckdb includes incorrect filepath

  #19 opened 8 months ago by caufieldjh
  0

• unzip: not found

  #16 opened 8 months ago by caufieldjh
  2

• Include metadata along with each table

  #13 opened 8 months ago by caufieldjh
  1

• Consider adding HP associations when doing HPvMP and HPvZP comparisons

  #14 opened 8 months ago by caufieldjh
  0

• Handle cases of CURIEs in closure but not in IC map

  #12 opened 8 months ago by caufieldjh
  0

• Update to use semsimian's custom IC maps

  #8 opened 8 months ago by caufieldjh
  2

• Add HTML file to enable browser-based viewing

  #11 opened 8 months ago by caufieldjh
  0

• Log the memory peak

  #7 opened a year ago by caufieldjh
  0

• Align with monarch-initiative/monarch-semantic-similarity-profiles

  #6 opened a year ago by matentzn
  0

• Compress the output

  #3 opened 2 years ago by caufieldjh
  0

• Omit labels from output

  #2 opened 2 years ago by caufieldjh
  0

• Duplicate prefix breaks run

  #1 opened 2 years ago by caufieldjh
  7