Pinned Repositories
Deltacoronavirus-sequence-analysis
Sequence analysis for selected Deltacoronavirus
epitope_diversity
Tool for estimating epitope diversity at haplotype level (using NGS reads). Written in Rust.
fasta_filter
A tool for filtering fasta sequences with threshold of specific bases (e.g. 'N'), written in Rust.
figleaf_fasta
Hard/soft-mask or exclude/extract FASTA sub-sequences
Koohoko.github.io
My personal website
Python_Web_Crawler
Hong Kong Meteorological Data Collection
Save-ggplot-to-pptx
Save ggplot to editable pptx file
SynMut
SynMut: An R Package for Designing Synonymously Mutated Sequences with Different Genomic Signatures
GEII
host Gene Expression under Influenza virus infection or Interferon stimulation (GEII)
global_genomic_surveillance_spatpomp_article
Public repository for the project of modelling global genomic surveillance effectiveness.
Koohoko's Repositories
Koohoko/epitope_diversity
Tool for estimating epitope diversity at haplotype level (using NGS reads). Written in Rust.
Koohoko/Save-ggplot-to-pptx
Save ggplot to editable pptx file
Koohoko/SynMut
SynMut: An R Package for Designing Synonymously Mutated Sequences with Different Genomic Signatures
Koohoko/Deltacoronavirus-sequence-analysis
Sequence analysis for selected Deltacoronavirus
Koohoko/Koohoko.github.io
My personal website
Koohoko/Python_Web_Crawler
Hong Kong Meteorological Data Collection
Koohoko/Codespaces_dotfile
Codespaces dotfile, please refer to https://docs.github.com/en/codespaces/customizing-your-codespace/personalizing-github-codespaces-for-your-account#dotfiles
Koohoko/fasta_filter
A tool for filtering fasta sequences with threshold of specific bases (e.g. 'N'), written in Rust.
Koohoko/figleaf_fasta
Hard/soft-mask or exclude/extract FASTA sub-sequences
Koohoko/Configure_new_server
Koohoko/Coronavirus_Bayseian_Modelling
Coronavirus_Bayseian_Modelling
Koohoko/Crawling-COVID-case-PDFs-from-Hong-Kong-GOV-website
Crawling COVID case PDFs from Hong Kong GOV website
Koohoko/data.table
R's data.table package extends data.frame:
Koohoko/Dinucleotide-Evolutionary-Dynamics-in-Influenza-A-Virus
Data of the study "Dinucleotide Evolutionary Dynamics in Influenza A Virus"
Koohoko/EFI-Xiaomi-Notebook-air-12-5
EFI Xiaomi Notebook air 12'5
Koohoko/gpt_academic
为ChatGPT/GLM提供图形交互界面，特别优化论文阅读/润色/写作体验，模块化设计，支持自定义快捷按钮&函数插件，支持Python和C++等项目剖析&自译解功能，PDF/LaTex论文翻译&总结功能，支持并行问询多种LLM模型，支持清华chatglm2等本地模型。兼容复旦MOSS, llama, rwkv, newbing, claude, claude2等
Koohoko/Little_Koo
My Raspberry Pi Robot
Koohoko/LRItool
LRItool
Koohoko/Minor-Variant-Phasing-Tool
Minor-Variant-Phasing-Tool for Pacbio data
Koohoko/nextjs-wedding-invite
Wedding invitation web app built using NextJS
Koohoko/Rosalind-rs
Rosalind solutions in Rust.
Koohoko/spatPomp
R package for statistical inference of spatiotemporal partially observed Markov processes
Koohoko/T-cell-activating-vaccines-flu-mutation
Data and codes for "T cell-activating vaccines increases selection bottlenecks for residual virus variation"
Koohoko/Time-series-analysis
Time series analysis of ILI cases in HK