Setup

How to get started in the Korf Lab

Slack

We communicate mostly by Slack. Meetings, requests for help, Zoom links etc. are shared in Slack.

There is only 1 pinned message in the #general channel. Read it.

This repository has a number of files, which are considered the onboarding documents for the lab. Please read them in the following order:

README.md this document
01MENTORING.md Ian's mentoring philosphy
02EXPECTATIONS.md what to expect when joining the lab
03RULES.md practices that are important enough to be called rules
04ENVIRONMENT.md set up your bioinformatics programming environment
05MISC.md random useful information
06DONT.md stuff you shouldn't do
profile something to source from your login script
bin some useful scripts if not to use, to think about
- memcheck examine memory
- redundancy_check look for duplicate files
- parallelize run a job list in parallel
lib some useful libraries
- korflab.py a few common operations, like reading fasta file