LAnAlchemist
A biochemist performing peptide/protein binder design at the Baker lab at Insititute for Protein Design @ UW Medicine.
The Baker Lab@IPD @UW Seattle
Pinned Repositories
aimnet
Atoms In Molecules Neural Network Potential
al-folio
A beautiful, simple, clean, and responsive Jekyll theme for academics
ALDE
Active Learning-Assisted Directed Evolution for Protein Engineering
alphafold
Open source code for AlphaFold.
BindCraft
User friendly and accurate binder design pipeline
blueprint_builder_demo
This repository contains the demonstrations prepared for report 'De novo protein design using the blueprint builder in Rosetta'.
machine-learning-book
Code Repository for Machine Learning with PyTorch and Scikit-Learn
PeptideModels
Code for peptide ligand design with machine learning models.
Psedocycles_NSMB
Pseudocycle_small_molecule_binder
Small_molecule_binder_design_use_pseudocycles
LAnAlchemist's Repositories
LAnAlchemist/Pseudocycle_small_molecule_binder
Small_molecule_binder_design_use_pseudocycles
LAnAlchemist/blueprint_builder_demo
This repository contains the demonstrations prepared for report 'De novo protein design using the blueprint builder in Rosetta'.
LAnAlchemist/Psedocycles_NSMB
LAnAlchemist/machine-learning-book
Code Repository for Machine Learning with PyTorch and Scikit-Learn
LAnAlchemist/PeptideModels
Code for peptide ligand design with machine learning models.
LAnAlchemist/aimnet
Atoms In Molecules Neural Network Potential
LAnAlchemist/al-folio
A beautiful, simple, clean, and responsive Jekyll theme for academics
LAnAlchemist/ALDE
Active Learning-Assisted Directed Evolution for Protein Engineering
LAnAlchemist/alphafold
Open source code for AlphaFold.
LAnAlchemist/BindCraft
User friendly and accurate binder design pipeline
LAnAlchemist/calculate_ppi_info
LAnAlchemist/d2l-zh
《动手学深度学习》：面向中文读者、能运行、可讨论。中英文版被70多个国家的500多所大学用于教学。
LAnAlchemist/esm
Evolutionary Scale Modeling (esm): Pretrained language models for proteins
LAnAlchemist/chai-lab
Chai-1, SOTA model for biomolecular structure prediction
LAnAlchemist/Graphormer
Graphormer is a general-purpose deep learning backbone for molecular modeling.
LAnAlchemist/ipd_server_code
Various base libraries for code at the IPD
LAnAlchemist/LAnAlchemist.github.io
Linna An, Ph.D.
LAnAlchemist/openai-assistants-quickstart
OpenAI Assistants API quickstart with Next.js.
LAnAlchemist/practicalAI-cn
AI实战-practicalAI 中文版
LAnAlchemist/RFdiffusion
Code for running RFdiffusion
LAnAlchemist/SaProt
[ICLR'24 spotlight] Saprot: Protein Language Model with Structural Alphabet
LAnAlchemist/what_are_embeddings
A deep dive into embeddings starting from fundamentals