Pinned Repositories
binder
Binder, tool for automatic generation of Python bindings
DeepAb
Deep learning models and structure realization scripts for the DeepAb antibody structure prediction method.
protein_generator
Joint sequence and structure generation with RoseTTAFold sequence space diffusion
PyRosetta.notebooks
Jupyter Notebooks for learning the PyRosetta platform for biomolecular structure prediction and design
RFDesign
Protein hallucination and inpainting with RoseTTAFold
RFdiffusion
Code for running RFdiffusion
rosetta
The Rosetta Bio-macromolecule modeling package.
Rosetta-DL
A bundle of deep-learning packages for biomolecular structure prediction and design contributed to the Rosetta Commons
RoseTTAFold
This package contains deep learning models and related scripts for RoseTTAFold
trRosetta2
Repository for publicly available deep learning models developed in Rosetta community
RosettaCommons's Repositories
RosettaCommons/RoseTTAFold
This package contains deep learning models and related scripts for RoseTTAFold
RosettaCommons/RFdiffusion
Code for running RFdiffusion
RosettaCommons/PyRosetta.notebooks
Jupyter Notebooks for learning the PyRosetta platform for biomolecular structure prediction and design
RosettaCommons/binder
Binder, tool for automatic generation of Python bindings
RosettaCommons/protein_generator
Joint sequence and structure generation with RoseTTAFold sequence space diffusion
RosettaCommons/RFDesign
Protein hallucination and inpainting with RoseTTAFold
RosettaCommons/rosetta
The Rosetta Bio-macromolecule modeling package.
RosettaCommons/DeepAb
Deep learning models and structure realization scripts for the DeepAb antibody structure prediction method.
RosettaCommons/Rosetta-DL
A bundle of deep-learning packages for biomolecular structure prediction and design contributed to the Rosetta Commons
RosettaCommons/FvHallucinator
RosettaCommons/rosetta_clone_tools
A public repository with scripts and tools for cloning and setting up RosettaCommons repositories.
RosettaCommons/AF2_peptide_hallucination
Code for designing binders to flexible peptides with AlphaFold2 Hallucination
RosettaCommons/demos
Demos of many Rosetta applications
RosettaCommons/pybind11
Seamless operability between C++11 and Python
RosettaCommons/pyrosetta_viewer3d
Display PackedPose objects, Pose objects, or PDB files within a Jupyter notebook and Google Colab
RosettaCommons/documentation
Documentation for Rosetta Applications
RosettaCommons/pyrosetta_scripts
A place in which scripts developed in PyRosetta can be stored and shared. In the not too distant future, these scripts will be tested along side the main repository to ensure that they continue to work even if we make changes to the interfaces of core classes.
RosettaCommons/rosetta_scripts_scripts
This is the repository where all developers writing protocols in XML should place all of their scripts
RosettaCommons/bakerlab_dotfiles
Configuration files the way we like 'em
RosettaCommons/jade2
General repository for python modules and scripts to aid in the design, analysis, and modeling of biomolecules.
RosettaCommons/pyrosetta_colab_setup
Files for our auxiliary pyrosetta_colab_setup PyPI package
RosettaCommons/rdkit
The official sources for the RDKit library
RosettaCommons/tools
Tools for parsing Rosetta source code and scripts for running specific Rosetta applications.
RosettaCommons/alphafold
Open source code for AlphaFold.
RosettaCommons/bcl_rosetta
A version of the Biochemical Library (BCL; https://github.com/BCLCommons/bcl) for integration with Rosetta.
RosettaCommons/tensorflow_graphs
trRosetta model binaries for using the trRosetta protocol within Rosetta proper
RosettaCommons/privileged_residues
RosettaCommons/scientific_benchmark_data
various input data for scientific benchmark tests
RosettaCommons/additional_protocol_data
A repository for holding canonical inputs for Rosetta used by some (but not all) protocols; this is for data too big to go in main/database and that is not tightly coupled to the code in main/.
RosettaCommons/AutoRotLib