Ladme

PhD student in the field of computational biochemistry at CEITEC, Czech Republic.

Pinned Repositories

backitup
Stupidly simple crate for backing up files and directories
Language:Rust00
contact
Contact Matrix Calculator
Language:C0 1 00
crosection
Cross-sectional area calculator
Language:C00
cylinder
Calculating Density Inside A Cylinder
Language:C0 1 00
density
Calculating Density in Gromacs Simulations
Language:C0 1 00
gcenter
Center Any Group in a Gromacs Trajectory
Language:Rust00
groan
GROmacs ANalysis library written in C
Language:C2 1 01
groan_rs
Gromacs Analysis Library for Rust
Language:Rust00
prepare_windows
Script for generating umbrella sampling windows
Language:Python10
xtcat
Fast XTC files concatenator written in Rust
Language:Rust1 1 00

Ladme's Repositories

Ladme/groan
GROmacs ANalysis library written in C
Language:C2 1 01
Ladme/prepare_windows
Script for generating umbrella sampling windows
Language:Python10
Ladme/xtcat
Fast XTC files concatenator written in Rust
Language:Rust1 1 00
Ladme/backitup
Stupidly simple crate for backing up files and directories
Language:Rust00
Ladme/contact
Contact Matrix Calculator
Language:C0 1 00
Ladme/crosection
Cross-sectional area calculator
Language:C00
Ladme/cylinder
Calculating Density Inside A Cylinder
Language:C0 1 00
Ladme/density
Calculating Density in Gromacs Simulations
Language:C0 1 00
Ladme/gcenter
Center Any Group in a Gromacs Trajectory
Language:Rust00
Ladme/groan_rs
Gromacs Analysis Library for Rust
Language:Rust00
Ladme/gselect
Selecting Atoms From Gromacs Simulations
Language:C0 1 00
Ladme/leaflets2ndx
NDX Groups for Membrane Leaflets
Language:C00
Ladme/memdian
Programs For MEMbrane DIsruption ANalysis
Language:C0 1 00
Ladme/multivalent
Code for MC simulations of multivalent binding
Language:Rust
Ladme/order
Calculate Coarse-Grained Lipid Order Parameters
Language:C1 0
Ladme/plot_scrambling
Script for plotting the results of fluoresence-based dithionite assay for scrambling activity
Language:Shell
Ladme/posdist
Calculate positions of atoms or distances between atoms
Language:C1 0
Ladme/rova_lumi
RoVa Lab LUMI Environment
Language:Shell
Ladme/scramblyzer
Toolbox For Analyzing Lipid Scrambling
Language:C
Ladme/vermouth-martinize-bug
Supplementary files for a reported vermouth-martinize bug
Language:Python