Pinned Repositories
bioconda-recipes
Conda recipes for the bioconda channel.
crisprseq
[Under construction] A pipeline for all crispr analyses
LaurenceKuhl
modules
Repository to host tool-specific module files for the Nextflow DSL2 community!
multi-package-containers
Testing building mulled containers for multi-requirement tools.
MultiQC
Aggregate results from bioinformatics analyses across many samples into a single report.
nanoseq
Nanopore demultiplexing, QC and alignment pipeline
Network_project
pipeline-docs
Docs for QBiC pipelines
poolQcrisprcleanR
Takes the output of the poolq software and runs crisprcleanR for synthetic lethal screens
LaurenceKuhl's Repositories
LaurenceKuhl/bioconda-recipes
Conda recipes for the bioconda channel.
LaurenceKuhl/crisprseq
[Under construction] A pipeline for all crispr analyses
LaurenceKuhl/LaurenceKuhl
LaurenceKuhl/modules
Repository to host tool-specific module files for the Nextflow DSL2 community!
LaurenceKuhl/multi-package-containers
Testing building mulled containers for multi-requirement tools.
LaurenceKuhl/MultiQC
Aggregate results from bioinformatics analyses across many samples into a single report.
LaurenceKuhl/nanoseq
Nanopore demultiplexing, QC and alignment pipeline
LaurenceKuhl/Network_project
LaurenceKuhl/pipeline-docs
Docs for QBiC pipelines
LaurenceKuhl/poolQcrisprcleanR
Takes the output of the poolq software and runs crisprcleanR for synthetic lethal screens
LaurenceKuhl/rmageddon-cli
A small linting command line tool for R container evaluation
LaurenceKuhl/rnadeseq
Differential gene expression analysis and pathway analysis of RNAseq data
LaurenceKuhl/r-container-lib
A collection of project-related Dockerfiles for a controlled R environment with defined R packages
LaurenceKuhl/regorafenib_manuscript_design_matrices
LaurenceKuhl/shrnacount
LaurenceKuhl/test-datasets
Test data to be used for automated testing with the nf-core pipelines
LaurenceKuhl/tools
Python package with helper tools for the nf-core community.
LaurenceKuhl/vcflib
C++ library and cmdline tools for parsing and manipulating VCF files
LaurenceKuhl/vcgermline
Report for germline Variant Calling
LaurenceKuhl/vcreport