Pinned Repositories
CellOracle
This is the alpha version of the CellOracle package
kallisto
Near-optimal RNA-Seq quantification
monocle3
RNA-seq-analysis
RNAseq analysis notes from Ming Tang
scRNA.seq.course
Analysis of single cell RNA-seq data course
scTenifoldKnk
R/MATLAB package to perform virtual knockout experiments on single-cell gene regulatory networks.
scTenifoldNet
A R/MATLAB package to construct and compare gene regulatory networks from single-cell transcriptomic data
seurat
R toolkit for single cell genomics
signac
R toolkit for the analysis of single-cell chromatin data
clusterProfiler
:bar_chart: A universal enrichment tool for interpreting omics data
Leonrunning's Repositories
Leonrunning/CellOracle
This is the alpha version of the CellOracle package
Leonrunning/kallisto
Near-optimal RNA-Seq quantification
Leonrunning/monocle3
Leonrunning/RNA-seq-analysis
RNAseq analysis notes from Ming Tang
Leonrunning/scRNA.seq.course
Analysis of single cell RNA-seq data course
Leonrunning/scTenifoldKnk
R/MATLAB package to perform virtual knockout experiments on single-cell gene regulatory networks.
Leonrunning/scTenifoldNet
A R/MATLAB package to construct and compare gene regulatory networks from single-cell transcriptomic data
Leonrunning/seurat
R toolkit for single cell genomics
Leonrunning/signac
R toolkit for the analysis of single-cell chromatin data