Pinned Repositories
awesome-cheatsheets
超级速查表 - 编程语言、框架和开发工具的速查表，单个文件包含一切你需要知道的东西 :zap:
BENGAL
Nextflow pipeline for cross-species integration and assessment of single cell RNA-seq datasets
ChromosomeMappings
This repository contains chromosome/contig name mappings between UCSC <-> Ensembl <-> Gencode for a variety of genomes.
code_NEE
The EXPANDE (EXpression Profiling AloNg Development and Evolution) project was supported in part by GrantsinAid from the Ministry of Education, Culture, Sports, Science & Technology, Japan (22128003, 24570243, and 22128001), and Platform for Dynamic Approaches to Living System from the Ministry of Education, Culture, Sports, Science and Technology, Japan.
ExonicPart_PSI
Refer to "Alternative Splicing Signatures in RNA-seq Data: Percent Spliced in (PSI)"
Human_Cortex_Dev_Multiome
Deposited codes for snMultiome in human cortex manuscript
Li-ZhiD's Repositories
Li-ZhiD/ChromosomeMappings
This repository contains chromosome/contig name mappings between UCSC <-> Ensembl <-> Gencode for a variety of genomes.
Li-ZhiD/Human_Cortex_Dev_Multiome
Deposited codes for snMultiome in human cortex manuscript
Li-ZhiD/awesome-cheatsheets
超级速查表 - 编程语言、框架和开发工具的速查表，单个文件包含一切你需要知道的东西 :zap:
Li-ZhiD/BENGAL
Nextflow pipeline for cross-species integration and assessment of single cell RNA-seq datasets
Li-ZhiD/code_NEE
The EXPANDE (EXpression Profiling AloNg Development and Evolution) project was supported in part by GrantsinAid from the Ministry of Education, Culture, Sports, Science & Technology, Japan (22128003, 24570243, and 22128001), and Platform for Dynamic Approaches to Living System from the Ministry of Education, Culture, Sports, Science and Technology, Japan.
Li-ZhiD/ExonicPart_PSI
Refer to "Alternative Splicing Signatures in RNA-seq Data: Percent Spliced in (PSI)"
Li-ZhiD/ExTraMapper
ExTraMapper is a tool to find Exon and Transcript-level Mappings of a given pair of orthologous genes between two organisms using sequence conservation.
Li-ZhiD/get_homologous_exons
Programs to extract homologous exons from sequence alignment
Li-ZhiD/GTEx-brain-sQTL
Li-ZhiD/ishere
Li-ZhiD/Li-ZhiD
Config files for my GitHub profile.
Li-ZhiD/mCNS-atlas
Li-ZhiD/scalop
Single Cell Analysis Operations
Li-ZhiD/SpatioTemporal_Analysis
This GitHub repository documents the findings of a spatiotemporal RNA-seq study on mouse brain aging, including 1,076 samples from 15 regions spanning 7 ages and two rejuvenating interventions.
Li-ZhiD/STdeconv_benchmark
The benchmarking of spatial transcriptomics deconvolution methods
Li-ZhiD/UCB
Li-ZhiD/vim
Personal Vim Profile
Li-ZhiD/visplot
Li-ZhiD/zero2one
Tips, functions and scripts about bioinformatics!