LifangHe
I have a broad research interest in machine learning, data mining, and biomedical informatics.
University of Pennsylvania
Pinned Repositories
atlasreader
Python interface for generating coordinate tables and region labels from statistical MRI images
awesome-deeplearning-resources
Deep Learning and deep reinforcement learning research papers and some codes
awesome-graph-classification
A collection of important graph embedding, classification and representation learning papers with implementations.
awesome-graph-explainability-papers
Papers about explainability of GNNs
BrainGNN_Pytorch
A preliminary implementation of BrainGNN
DeepLearning
GWAS-BCCAD
Analysis Pipelines to replicatet the analysis of: Genome-Wide Association Study of Brain Connectivity Changes for Alzheimer’s Disease
KDD16_HAM
Joint Community and Structural Hole Spanner Detection via Harmonic Modularity
NeurIPS18_SURF
Boosted Sparse and Low-Rank Tensor Regression
SDM14_DuSK
DuSK: A Dual Structure-preserving Kernel for Supervised Tensor Learning with Applications to Neuroimages
LifangHe's Repositories
LifangHe/NeurIPS18_SURF
Boosted Sparse and Low-Rank Tensor Regression
LifangHe/KDD16_HAM
Joint Community and Structural Hole Spanner Detection via Harmonic Modularity
LifangHe/3DUnet-Tensorflow-Brats18
3D Unet biomedical segmentation model powered by tensorpack with fast io speed
LifangHe/Attention-Gated-Networks
Use of Attention Gates in a Convolutional Neural Network / Medical Image Classification and Segmentation
LifangHe/Beijing-PM2.5-Forecasting
Prediction of Beijing PM2.5 using classic machine learning methods
LifangHe/brain-gcn-2
LifangHe/CLaR
Concomitant Lasso with Repetitions
LifangHe/closed-form-matting
Python implementation of A. Levin D. Lischinski and Y. Weiss. A Closed Form Solution to Natural Image Matting. IEEE Conf. on Computer Vision and Pattern Recognition (CVPR), June 2006, New York
LifangHe/cnn-graph-classification
A convolutional neural network for graph classification in PyTorch
LifangHe/Deep-MRI-Reconstruction
Deep Cascade of Convolutional Neural Networks for MR Image Reconstruction: Implementation & Demo
LifangHe/FuzzConn
Matlab code for image segmentation by Fuzzy Connectedness
LifangHe/HGNN
Hypergraph Neural Networks (AAAI 2019)
LifangHe/influence-release
LifangHe/LungCancerDetection
Use CNN to detect nodules in LIDC dataset.
LifangHe/matlab-common-tools
A collection of independent tools, by folder, for surgical and interventional applications
LifangHe/mba
Demo code for the paper: Mini-Batch AUC Optimization
LifangHe/medSynthesis
medical image synthesis with GAN framework based on tensorflow (we also have a better version in pytorch: https://github.com/ginobilinie/medSynthesisV1)
LifangHe/meta-transfer-learning
LifangHe/MLSTM-FCN
Multivariate LSTM Fully Convolutional Networks for Time Series Classification
LifangHe/MultimodalPrognosis
Deep Learning with Multimodal Representation for Pancancer Prognosis Prediction
LifangHe/MVGCN
LifangHe/osqp-python
Python interface for OSQP
LifangHe/PCCA
Code for performing PCA followed by CCA
LifangHe/retina-features
Project for segmentation of blood vessels, microaneurysm and hardexudates in fundus images.
LifangHe/Robust-Streaming-Tensor-Factorization
LifangHe/SemanticSegmentation_DL
Resources of semantic segmantation based on Deep Learning model
LifangHe/StackExchangeCodes
Codes related to answers on StackExchange Network.
LifangHe/Strabismus-Detection-for-Telemedicine-Application
LifangHe/tslearn
A machine learning toolkit dedicated to time-series data
LifangHe/YNet
Y-Net: Joint Segmentation and Classification for Diagnosis of Breast Biopsy Images