LudvigOlsen
PhD student at the Department of Molecular Medicine (MOMA), Aarhus University Hospital. MSc Cognitive Science.
Aarhus, Denmark
Pinned Repositories
cvms
R Package: Cross-validate one or multiple gaussian or binomial regression models at once. Perform repeated cross-validation. Returns results in a tibble for easy comparison, reporting and further analysis.
groupdata2
R-package: Methods for dividing data into groups. Create balanced partitions and cross-validation folds. Perform time series windowing and general grouping and splitting of data. Balance existing groups with up- and downsampling or collapse them to fewer groups.
insertImage
RStudio addin for inserting an image into Markdown with file chooser and copy the image file to the project.
nattrs
Nested attributes/dict members utility functions for python.
rearrr
Rearrrange data by a set of methods
splitChunk
RStudio addin for splitting R Markdown code chunks
twitter_streaming
A full setup for streaming tweets with tweepy, storing them in mongodb and sending emails if non-trivial errors occur.
utipy
Python utilities, e.g. for pandas
vocabular2
Tools for document vocabulary comparison
xpectr
R package for generating expectations for `testthat` unit testing
LudvigOlsen's Repositories
LudvigOlsen/cvms
R Package: Cross-validate one or multiple gaussian or binomial regression models at once. Perform repeated cross-validation. Returns results in a tibble for easy comparison, reporting and further analysis.
LudvigOlsen/xpectr
R package for generating expectations for `testthat` unit testing
LudvigOlsen/groupdata2
R-package: Methods for dividing data into groups. Create balanced partitions and cross-validation folds. Perform time series windowing and general grouping and splitting of data. Balance existing groups with up- and downsampling or collapse them to fewer groups.
LudvigOlsen/rearrr
Rearrrange data by a set of methods
LudvigOlsen/utipy
Python utilities, e.g. for pandas
LudvigOlsen/twitter_streaming
A full setup for streaming tweets with tweepy, storing them in mongodb and sending emails if non-trivial errors occur.
LudvigOlsen/vocabular2
Tools for document vocabulary comparison
LudvigOlsen/delfi_scripts
Fork of the DELFI method.
LudvigOlsen/generalize
Machine learning tools for running repeated nested cross(-dataset)-validation.
LudvigOlsen/LRO.utilities
Utility functions for R and addins for RStudio
LudvigOlsen/LudvigOlsen
GitHub profile repository
LudvigOlsen/nattrs
Nested attributes/dict members utility functions for python.
LudvigOlsen/nlp_exam
Exam project for Natural Language Processing at Aarhus University
LudvigOlsen/plot_confusion_matrix
LudvigOlsen/align-linguistic-alignment
Python library for extracting quantitative, reproducible metrics of multi-level alignment between two speakers in naturalistic language corpora.
LudvigOlsen/bookdown-demo
A minimal book example using bookdown
LudvigOlsen/dicom-anonymizer
Tool to anonymize DICOM files according to the DICOM standard
LudvigOlsen/draw_convnet
LudvigOlsen/evolutionaryComputing
Repository for project in Evolutionary Computing at VU
LudvigOlsen/Gapur
Hi there 🖖, This is my Github README.
LudvigOlsen/Griffin
A flexible framework for nucleosome profiling of cell-free DNA
LudvigOlsen/Griffin_analyses
Scripts for analyses in the Griffin manuscript
LudvigOlsen/LIQUORICE
A tool to detect tissue- and cancer- specific epigenetic signatures in WGS data of liquid biopsies
LudvigOlsen/MEG-fMRI-group2
MEG and fMRI analysis scripts for study group at Adv. Cognitive Neuroscience, AU.
LudvigOlsen/mosdepth
fast BAM/CRAM depth calculation for WGS, exome, or targeted sequencing
LudvigOlsen/mscthesis_public
Code for my MSc thesis.
LudvigOlsen/readme_plots
Storage for large plots/gifs for readme files and vignettes. This decreases the size for the repositories.
LudvigOlsen/reproduce_lucas_wflow
LudvigOlsen/rtilities2
Utilities for R development
LudvigOlsen/VAD-python
Voice Activity Detector in Python