Lycas

Lycas's Stars

• tatsu-lab/stanford_alpaca

  Code and documentation to train Stanford's Alpaca models, and generate the data.

  Language:Python29.6k3422684.1k

• paperswithcode/galai

  Model API for GALACTICA

  Language:Jupyter Notebook2.7k4471276

• wolny/pytorch-3dunet

  3D U-Net model for volumetric semantic segmentation written in pytorch

  Language:Jupyter Notebook2k360509

• openUC2/UC2-GIT

  Respository for Open-Science modular microscope system.

  Language:Jupyter Notebook464458769

• ml-struct-bio/cryodrgn

  Neural networks for cryo-EM reconstruction

  Language:Python3231328676

• seung-lab/kimimaro

  Skeletonize densely labeled 3D image segmentations with TEASAR. (Medial Axis Transform)

  Language:C++136265623

• BlueBrain/NeuroMorphoVis

  A lightweight, interactive, extensible and cross-platform framework for building, visualizing and analyzing digital reconstructions of neuronal morphology skeletons extracted from microscopy stacks.

  Language:Python1291020427

• TuragaLab/DECODE

  This is the official implementation of our publication "Deep learning enables fast and dense single-molecule localization with high accuracy" (Nature Methods)

  Language:Python95713326

• oanegros/tif2blender

  Loading and handling microscopy data in blender

  Language:Python793364

• WeisongZhao/Sparse-SIM

  Official MATLAB implementation of the "Sparse deconvolution" -v1.0.3

  Language:MATLAB7741513

• jries/SMAP

  Language:MATLAB6491720

• teamtomo/membrain-seg

  membrane segmentation in 3D for cryo-ET

  Language:Python5943214

• warpem/warp

  Language:C#4231717

• guiwitz/naparimovie

  Create movies from series of key-frames in napari.

  Language:Python38455

• mesoSPIM/mesoSPIM-hardware-documentation

  Hardware documentation for the mesoSPIM microscope project

  331784

• mmkamani7/Skeletonization

  In this repository you can see the code for skeletonization of binary images using our novel fuzzy inference system.

  Language:Python32258

• anmartinezs/pyseg_system

  De novo analysis for cryo-electron tomography

  Language:Python213134

• Haifafh/MFAT

  MATLAB implementation of '2D and 3D Vascular Structures Enhancement via Multiscale Fractional Anisotropy Tensor (MFAT)'

  Language:MATLAB20237

• HenriquesLab/NanoJ-eSRRF

  Language:Java193112

• qnano/drift-estimation

  Drift estimation

  Language:C++15432

• YonekuraLab/CryoGridTools

  3D printing data in "Tidy up cryo-EM sample grids with 3D printed tools"

  14101

• LEB-EPFL/DEFCoN

  Single molecule density estimation by fully convolutional neural networks

  Language:Python11401

• JCDesignsCalifornia/manualplungefreezer

  Manual Plunge Freezer

  8300

• kgrussmayer/sofipackage

  Sofipackage is a Matlab-based software for super-resolution optical fluctuation imaging (SOFI) analysis.

  Language:MATLAB8123

• CBI-PITT/napari-imaris-loader

  Language:Python6187

• frankfazekas/Mean-Shift-Drift-Correction

  Language:MATLAB4202

• LEB-EPFL/project_layout

  Language:Python2100

• LEB-EPFL/ptycho

  Hardware control and image analysis code for Fourier ptychography.

  Language:Jupyter Notebook2100

• super-resolution/ReCSAI

  SMLM reconstruction software

  Language:Jupyter Notebook1200

• UPGON/cenfind

  CenFind is a pipeline to automatically score centrioles in cells.

  Language:Python13110