MG-RAST

The MG-RAST metagenome portal

Argonne Illinois

Pinned Repositories

AWE
workflow and resource management system for bioinformatics data analysis
Language:Go69 10 5121
DRISEE
duplicate read inferred sequencing error estimator
Language:Python9 9 13
kmerspectrumanalyzer
Language:Python11 12 06
matR
Metagenomics Analysis Tools
Language:R24 16 2410
MG-RAST
The MG-RAST Backend -- the API server
Language:Perl44 11 1228
MG-RAST-Tools
Repository of script tools, examples, and contributed code for using the MG-RAST API
Language:Python26 14 2025
MG-RASTv4
The MG-RAST frontend -- the JavaScript web site
Language:HTML8 7 88
pipeline
The MG-RAST pipeline
Language:Common Workflow Language24 11 319
Shock
An object store for scientific data
Language:Go51 12 3223
Skyport2
framework for large scale data management and reproducible multi-cloud workflow execution
Language:Perl5 4 56

MG-RAST's Repositories

MG-RAST/AWE
workflow and resource management system for bioinformatics data analysis
Language:Go69 10 5121
MG-RAST/Shock
An object store for scientific data
Language:Go51 12 3223
MG-RAST/MG-RAST
The MG-RAST Backend -- the API server
Language:Perl44 11 1228
MG-RAST/MG-RAST-Tools
Repository of script tools, examples, and contributed code for using the MG-RAST API
Language:Python26 14 2025
MG-RAST/pipeline
The MG-RAST pipeline
Language:Common Workflow Language24 11 319
MG-RAST/DRISEE
duplicate read inferred sequencing error estimator
Language:Python9 9 13
MG-RAST/MG-RASTv4
The MG-RAST frontend -- the JavaScript web site
Language:HTML8 7 88
MG-RAST/Skyport2
framework for large scale data management and reproducible multi-cloud workflow execution
Language:Perl5 4 56
MG-RAST/MG-RAST-infrastructure
CoreOS/Fleet Infrastructure for MG-RAST
Language:Shell3 7 02
MG-RAST/myM5NR
M5NRv2 -- non-redundant protein and rRNA database integration
Language:Perl3 9 23
MG-RAST/Retina
JavaScript library used in MG-RAST and skycore
Language:JavaScript3 7 15
MG-RAST/go-shock-client
go client library for Shock
Language:Go2 5 02
MG-RAST/golib
Language:Go2 7 04
MG-RAST/tech-report
MG-RAST manual and documentation
Language:TeX2 11 011
MG-RAST/amplicon
Language:Common Workflow Language1 7 13
MG-RAST/anl-seq-service
Language:Shell1 3 31
MG-RAST/autoskewer
Repository for wrapper scripts for adapter trimming of high throughput sequence data, mostly illumina.
Language:Python1 2 04
MG-RAST/CWL-Tools
CWL Tool repository
Language:Common Workflow Language1 5 0
MG-RAST/ebi-submitter
Tools for submitting public MG-RAST jobs to the EBI's ENA archive
Language:Perl1 6 02
MG-RAST/DataManager
Language:Python0 3 00
MG-RAST/API-testing
test script and data for MG-RAST API tests
Language:Python6 03
MG-RAST/assembly-and-clustering
Assembly and clustering workflow
5 0
MG-RAST/authServer
oAuth authentication server with rights management
Language:Perl5 12
MG-RAST/awe-monitor
Monitor for the AWE server
Language:JavaScript1 01
MG-RAST/go-rwmutex
go library of a read-write mutex
Language:Go3 0
MG-RAST/MG-RAST-exporter
Language:Go5 01
MG-RAST/qiime-pipeline
MG-RAST embedded QIIME pipeline using CWL
Language:Common Workflow Language6 01
MG-RAST/SequenceCenter
Sequencing Center Data Management App
Language:JavaScript5 02
MG-RAST/skewer
Language:C++3 0
MG-RAST/Skyport2-Workflows-Tutorial
Language:Shell4 0