MGCarta

Bioinformatician for the Molecular Diagnostics at Universitätsklinikum Erlangen, Germany

Universitätklinikum ErlangenErlangen, Germany

Pinned Repositories

TMBleR
R package to calculate the Tumor Mutatioanl Burder in WES and genomics targeted panels
Language:R7 4 51
ensembl-vep
The Ensembl Variant Effect Predictor predicts the functional effects of genomic variants
Language:Perl460 29 1.1k154
VEP_plugins
Plugins for the Ensembl Variant Effect Predictor (VEP)
Language:Perl142 22 211117
ComplexHeatmap
Make Complex Heatmaps
Language:R1.3k 35 1.2k228
gcb_ngs_harmonisation_workshop
Materials for NGS Harmonization Workshop at GCB 2024
00
MGCarta
Config files for my GitHub profile.
0 1 00
sarek
Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing
Language:Nextflow414 135 730417

MGCarta's Repositories

MGCarta/oncovi
Oncogenicity Variant Interpreter for somatic variants
Language:Python3
MGCarta/gcb_ngs_harmonisation_workshop
Materials for NGS Harmonization Workshop at GCB 2024
00
MGCarta/MGCarta
Config files for my GitHub profile.
0 1 00