MIC-DKFZ/BraTS2017

Issues

• Question: No New Net (2019)

  #33 opened 5 years ago by stalhabukhari
  2

• Questions about your Paper

  #32 opened 5 years ago by joe1chief
  1

• Docker container of BraTS 2017

  #31 opened 6 years ago by pykao
  0

• Preprocessing: Bias field correction

  #30 opened 6 years ago by akhanss
  2

• Why could a multiclass dice loss function solve the class imbalance problem?

  #29 opened 6 years ago by yianzhongguo
  2

• Why pad the image into a shape whose sizes are multiple of 16 before put it in the prediction function

  #28 opened 6 years ago by yianzhongguo
  2

• Why to get prediction this way

  #27 opened 6 years ago by yianzhongguo
  2

• How to change the predicted image into the original shape?

  #26 opened 6 years ago by yianzhongguo
  2

• About the validation and test

  #25 opened 6 years ago by yianzhongguo
  2

• Why reshape the y_true and y_pred in the function soft_dice_per_img_in_batch

  #24 opened 6 years ago by yianzhongguo
  2

• The patch size in the create_data_gen_train function

  #23 opened 6 years ago by yianzhongguo
  2

• Why are convolution layer and nonlinear layer seperate?

  #22 opened 6 years ago by yianzhongguo
  1

• /batchgenerators/batchgenerators/augmentations/crop_and_pad_augmentations.py:140: UserWarning: Raause the crop along with the dasired margin does not fit the data. data: (1, 4, 160, 192, 160), crop_s4.0] str(margins)))

  #20 opened 6 years ago by yianzhongguo
  5

• Can I accelerate the training course with GPU?

  #21 opened 6 years ago by yianzhongguo
  1

• A question about the dice loss

  #18 opened 6 years ago by yianzhongguo
  2

• Different data_gen_train in different eporchs

  #19 opened 6 years ago by yianzhongguo
  2

• How can it be transformed into dimension 5 in the line 139:"l = DimshuffleLayer(l, (0, 2, 3, 4, 1))" which seems to increace dimension batch

  #17 opened 6 years ago by yianzhongguo
  6

• Why transpose the seg?

  #15 opened 6 years ago by yianzhongguo
  1

• Cross validation/Generating Data

  #16 opened 6 years ago by samieti02
  1

• The losss_vec and loss location in train_fn

  #12 opened 6 years ago by yianzhongguo
  3

• Too few informations in readme leads to many mistakes

  #13 opened 6 years ago by samieti02
  1

• Questions about mlp and hidden layers in paper/code

  #14 opened 6 years ago by samieti02
  1

• What the variable t1km_sum is

  #11 opened 6 years ago by yianzhongguo
  2

• cut_off_values_upper_lower_percentile

  #10 opened 6 years ago by yianzhongguo
  3

• Trained model and feature visualization

  #8 opened 6 years ago by samieti02
  1

• Do I have to split the training data to five parts to do cross-validation myself?

  #7 opened 6 years ago by wyzjack
  9

• What is the brain_mask

  #9 opened 6 years ago by yianzhongguo
  2

• where is the folder 'dldabg'?

  #6 opened 6 years ago by wyzjack
  0

• A question on the context pathway

  #3 opened 7 years ago by pykao
  2

• A question on the localization pathway

  #4 opened 7 years ago by pykao
  2

• ImportError: cannot import name downsample

  #2 opened 7 years ago by pykao
  2

• error in running pre-processing step

  #1 opened 7 years ago by poornasandur
  2