MIMIR-BIOMEDICAL/mobile-unetplusplus-cac-scoring

Issues

• CoCa Dataset

  #186 opened 4 months ago by SantiagoPendon
  2

• COCa dataset image precess

  #185 opened 5 months ago by CharisWg
  1

• Hotfix for supercomp

  #181 opened a year ago by ditwrd
  0

• Clean up

  #180 opened a year ago by ditwrd
  0

• Hotfix binary

  #177 opened a year ago by ditwrd
  0

• Fix monitor for bin class

  #174 opened a year ago by ditwrd
  0

• Added learning rate scheduler

  #170 opened a year ago by ditwrd
  0

• Create mult output branch

  #171 opened a year ago by ditwrd
  0

• Create flood fill with filter for patient that can't be filled

  #168 opened a year ago by ditwrd
  0

• Create Streamlit App

  #167 opened a year ago by ditwrd
  0

• use binaryfocalcrossentropy from keras

  #161 opened a year ago by ditwrd
  0

• Create all positive dataset

  #165 opened a year ago by ditwrd
  0

• Make random undersampling

  #160 opened a year ago by ditwrd
  0

• Used mobilenetv2 pretrained backbone approach for unet++

  #162 opened a year ago by ditwrd
  0

• fix testing notebook

  #158 opened a year ago by ditwrd
  0

• Notebook for system technical data acquisition

  #145 opened a year ago by ditwrd
  0

• Add back random oversampling

  #156 opened a year ago by ditwrd
  0

• Add missing cli param for log cosh focal

  #154 opened a year ago by ditwrd
  0

• Remove unnecessary metric on training

  #151 opened a year ago by ditwrd
  0

• Add back tensorflow compression

  #148 opened a year ago by ditwrd
  0

• Reverse segmentation image index

  #146 opened a year ago by ditwrd
  0

• Notebook for model technical data acquisition

  #143 opened a year ago by ditwrd
  0

• Simplified problem to binary classification

  #140 opened a year ago by ditwrd
  0

• Fix system pipeline lesion coord x,y flipped due to row,col

  #129 opened a year ago by ditwrd
  0

• Fix default basic unet++

  #138 opened a year ago by ditwrd
  0

• Add data testing notebook

  #136 opened a year ago by ditwrd
  0

• Add back unified focal loss with multiclass support

  #132 opened a year ago by ditwrd
  0

• Fix typo on training

  #130 opened a year ago by ditwrd
  0

• Add cli selection for exponential decay rate

  #127 opened a year ago by ditwrd
  0

• Resample data for model

  #125 opened a year ago by ditwrd
  0

• Added Dice loss without bg

  #122 opened a year ago by ditwrd
  0

• Create Dice Focal Loss

  #120 opened a year ago by ditwrd
  0

• Added learning scheduler

  #118 opened a year ago by ditwrd
  0

• Fix params on modelcheckpoint

  #116 opened a year ago by ditwrd
  0

• Added custom dice coef metrics

  #114 opened a year ago by ditwrd
  0

• Added multiple callback to save model for every epoch and best model

  #112 opened a year ago by ditwrd
  0

• Add missing preprocess function on auto cac system

  #109 opened a year ago by ditwrd
  0

• Add weighted categorical crossentropy

  #108 opened a year ago by ditwrd
  0

• Resample dataset to reduce imbalanced dataset

  #106 opened a year ago by ditwrd
  0

• Move flood fill algorithm on segmentation preprocessing

  #104 opened a year ago by ditwrd
  0

• Revamp gcs-cli and make gcs-cli-non to use official cli

  #101 opened a year ago by ditwrd
  0

• Troubleshoot exploding/vanishing gradient

  #99 opened a year ago by ditwrd
  0

• Fix model training cli

  #97 opened a year ago by ditwrd
  0

• Try every possible loss function

  #93 opened a year ago by ditwrd
  0

• Postprocessing: create postprocessing pipeline

  #94 opened a year ago by ditwrd
  0

• Postprocessing: Agatston Algorithm on post processing

  #91 opened a year ago by ditwrd
  0

• Postprocessing: Connected Component Labelling

  #84 opened a year ago by ditwrd
  0

• Rework preprocessing method

  #88 opened a year ago by ditwrd
  0

• Remove binary segmentation as model output

  #85 opened a year ago by ditwrd
  0

• Add flood fill for segmentation data to get full segmentation rather than perimeter segmentation

  #82 opened a year ago by ditwrd
  0