mri-segmentation
There are 70 repositories under mri-segmentation topic.
neuroneural/brainchop
Brainchop: In-browser 3D MRI rendering and segmentation
shalabh147/Brain-Tumor-Segmentation-and-Survival-Prediction-using-Deep-Neural-Networks
Use of state of the art Convolutional neural network architectures including 3D UNet, 3D VNet and 2D UNets for Brain Tumor Segmentation and using segmented image features for Survival Prediction of patients through deep neural networks.
makama-md/AI-for-Medical-Diagnosis
This repo contain my assignment notebooks for the Coursera AI for Medicine Specialization course. The link to the course: https://www.coursera.org/specializations/ai-for-medicine
LightersWang/3DUNet-BraTS-PyTorch
PyTorch 3D U-Net implementation for Multimodal Brain Tumor Segmentation (BraTS 2021)
as791/Multimodal-Brain-Tumor-Segmentation
Multimodal Brain Tumor Segmentation using BraTS 2018 Dataset.
ubamba98/Brain-Segmentation
Brain Segmentation on MRBrains18
volBrain/AssemblyNet
AssemblyNet: 3D Whole Brain MRI segmentation pipeline
AghdamAmir/3D-UNet
A pytorch implementation of 3D UNet for 3D MRI Segmentation.
ChristianGaser/cat12
Computational Anatomy Toolbox for SPM12
Deep-MI/FatSegNet
Deep CNN for Abdominal Adipose Tissue Segmentation on Dixon MRI
Macatools/macapype
PNH segmentation pipelines based on nipype
shakex/recurrent-decoding-cell
[AAAI'20] Segmenting Medical MRI via Recurrent Decoding Cell (Spotlight)
salmansust/AI-For-Medicine-Specialization
I have completed this specialization from Coursera by deeplearning.ai. I have uploaded the solutions of the assignments in this repo.
tayebiarasteh/federated_he
Federated learning with homomorphic encryption enables multiple parties to securely co-train artificial intelligence models in pathology and radiology, reaching state-of-the-art performance with privacy guarantees.
bartbols/SASHIMI
SASHIMI segmentation is a Matlab App for semi-automatic interactive segmentation of multi-slice images.
AxDante/SAAMI
Automatic segment and generate masks for any 3D medical images using SAM model without prompt
aksg87/adpkd-segmentation-pytorch
Segmentation of kidneys on MRI in Autosomal Dominant Polycystic Kidney
jingyunc/wmhs
Automated subdivision of white matter hyperintensities
673958639/Convolutional-Neural-Network-for-Brain-Lesion-Segmentation-in-MRI-Images
In this work, four popular deep convolutional neural networks (U-NET, DeepLab, FCN and SegNet) for image segmentation are constructed and compared. This comparison reveals the tradeoff between achieving effective segmentation and segmentation accuracy. Using deep learning, specifically convolutional neural network methods, to build and train models
SABS-R3-projects/Paint4Brains
A brain MRI segmentation tool that provides accurate robust segmentation of problematic brain regions across the neurodegenerative spectrum. The methodology is generalisable to perform well with the typical variance in MRI acquisition parameters and other factors that influence image contrast.
AKuzina/DWP
Pytorch implementation of the DWP with application to MRI segmentation
himashi92/vizviva_fets_2022
Official PyTorch Code for Hybrid Window Attention Based Transformer Architecture for Brain Tumor Segmentation: Solution for FeTS 2022 Task 2
pimed/SPCNet
TensorFlow implementation of our paper: "Automated detection of aggressive and indolent prostate cancer on magnetic resonance imaging [Medical Physics 2021]".
ElliotY-ML/Hippocampus_Segmentation_MRI
Udacity AI for Healthcare Nanodegree Project: Measurement of Hippocampus Structure in MRI 3-D Images using Deep Learning Image Segmentation
antoinedelplace/MRI-Segmentation
Magnetic Resonance Images segmentation by Deep Neural Networks (Master Thesis)
MIMIR-BIOMEDICAL/mobile-unetplusplus-cac-scoring
Implementation of UNET++ for CAC Scoring using Tensorflow
TUDelftHao/4DLongitudinal-MRI-Segmentation-Network
This is my Master thesis work at TU Delft, to longitudinally segment the MRI brain image series by 4D network.
AHMEDSANA/Four-class-Brain-tumor-segmentation.
We segmented the Brain tumor using Brats dataset and as we know it is in 3D format we used the slicing method in which we slice the images in 2D form according to its 3 axis and then giving the model for training then combining waits to segment brain tumor. We used UNET model for training our dataset.
ChristianGaser/tfce
Threshold-free cluster enhancement toolbox for Matlab
giuseppefilitto/img-segm
automatic pipeline based on MRI segmentation and features extraction
gogolB/Brain_Lesion_Segmetation
Project for UCSF 265
morteza89/Brain-Tumor-Segmentation
In this project I'm going to segment Tumor in MRI brain Images with a UNET which is based on Keras. The dataset is available online on Kaggle, and the algorithm provided 99% accuracy with a validation loss of 0.11 in just 10 epochs.
gtaberna/mrtim
MR-TIM: MR-based head tissue modelling
high-dimensional/tumour-seg
This is a repository hosting all models detailed in the article Brain tumour segmentation with incomplete imaging data.
Thehunk1206/MeSAI
This repository contains 3D-Unet Based segmentation models with different settings. I'll be comparing different models with different settings.