mri-segmentation

neuroneural/brainchop

Brainchop: In-browser 3D MRI rendering and segmentation

shalabh147/Brain-Tumor-Segmentation-and-Survival-Prediction-using-Deep-Neural-Networks

Use of state of the art Convolutional neural network architectures including 3D UNet, 3D VNet and 2D UNets for Brain Tumor Segmentation and using segmented image features for Survival Prediction of patients through deep neural networks.

makama-md/AI-for-Medical-Diagnosis

This repo contain my assignment notebooks for the Coursera AI for Medicine Specialization course. The link to the course: https://www.coursera.org/specializations/ai-for-medicine

LightersWang/3DUNet-BraTS-PyTorch

PyTorch 3D U-Net implementation for Multimodal Brain Tumor Segmentation (BraTS 2021)

volBrain/AssemblyNet

AssemblyNet: 3D Whole Brain MRI segmentation pipeline

aghdamamir/3D-UNet

A pytorch implementation of 3D UNet for 3D MRI Segmentation.

as791/Multimodal-Brain-Tumor-Segmentation

Multimodal Brain Tumor Segmentation using BraTS 2018 Dataset.

ubamba98/Brain-Segmentation

Brain Segmentation on MRBrains18

ChristianGaser/cat12

Computational Anatomy Toolbox for SPM12 or SPM25

tayebiarasteh/federated_he

Federated learning with homomorphic encryption enables multiple parties to securely co-train artificial intelligence models in pathology and radiology, reaching state-of-the-art performance with privacy guarantees.

wwu-mmll/deepmriprep

Neural network-based preprocessing of MRI data: Prepping brain images in seconds 🔥

Deep-MI/FatSegNet

Deep CNN for Abdominal Adipose Tissue Segmentation on Dixon MRI

Macatools/macapype

PNH segmentation pipelines based on nipype

shakex/recurrent-decoding-cell

[AAAI'20] Segmenting Medical MRI via Recurrent Decoding Cell (Spotlight)

salmansust/AI-For-Medicine-Specialization

I have completed this specialization from Coursera by deeplearning.ai. I have uploaded the solutions of the assignments in this repo.

bartbols/SASHIMI

SASHIMI segmentation is a Matlab App for semi-automatic interactive segmentation of multi-slice images.

LidiaGarrucho/MAMA-MIA

The MAMA-MIA Dataset: A Multi-Center Breast Cancer DCE-MRI Public Dataset with Expert Segmentations

AxDante/SAAMI

Automatic segment and generate masks for any 3D medical images using SAM model without prompt

ElliotY-ML/Hippocampus_Segmentation_MRI

Udacity AI for Healthcare Nanodegree Project: Measurement of Hippocampus Structure in MRI 3-D Images using Deep Learning Image Segmentation

673958639/Convolutional-Neural-Network-for-Brain-Lesion-Segmentation-in-MRI-Images

In this work, four popular deep convolutional neural networks (U-NET, DeepLab, FCN and SegNet) for image segmentation are constructed and compared. This comparison reveals the tradeoff between achieving effective segmentation and segmentation accuracy. Using deep learning, specifically convolutional neural network methods, to build and train models

aksg87/adpkd-segmentation-pytorch

Segmentation of kidneys on MRI in Autosomal Dominant Polycystic Kidney

jingyunc/wmhs

Automated subdivision of white matter hyperintensities

SABS-R3-projects/Paint4Brains

A brain MRI segmentation tool that provides accurate robust segmentation of problematic brain regions across the neurodegenerative spectrum. The methodology is generalisable to perform well with the typical variance in MRI acquisition parameters and other factors that influence image contrast.

AKuzina/DWP

Pytorch implementation of the DWP with application to MRI segmentation

himashi92/vizviva_fets_2022

Official PyTorch Code for Hybrid Window Attention Based Transformer Architecture for Brain Tumor Segmentation: Solution for FeTS 2022 Task 2

pimed/SPCNet

TensorFlow implementation of our paper: "Automated detection of aggressive and indolent prostate cancer on magnetic resonance imaging [Medical Physics 2021]".

MIMIR-BIOMEDICAL/mobile-unetplusplus-cac-scoring

Implementation of UNET++ for CAC Scoring using Tensorflow

ChristianGaser/tfce

Threshold-free cluster enhancement toolbox for Matlab

antoinedelplace/MRI-Segmentation

Magnetic Resonance Images segmentation by Deep Neural Networks (Master Thesis)

volBrain/DeeplesionBrain

AHMEDSANA/Four-class-Brain-tumor-segmentation

We segmented the Brain tumor using Brats dataset and as we know it is in 3D format we used the slicing method in which we slice the images in 2D form according to its 3 axis and then giving the model for training then combining waits to segment brain tumor. We used UNET model for training our dataset.

innoisys/ArachNet

Official Implementation of ARACHNET: INTERPRETABLE SUB-ARACHNOID SPACE SEGMENTATION USING AN ADDITIVE CONVOLUTIONAL NEURAL NETWORK

TUDelftHao/4DLongitudinal-MRI-Segmentation-Network

This is my Master thesis work at TU Delft, to longitudinally segment the MRI brain image series by 4D network.

giuseppefilitto/img-segm

automatic pipeline based on MRI segmentation and features extraction

morteza89/Brain-Tumor-Segmentation

In this project I'm going to segment Tumor in MRI brain Images with a UNET which is based on Keras. The dataset is available online on Kaggle, and the algorithm provided 99% accuracy with a validation loss of 0.11 in just 10 epochs.