ML4BM-Lab

Pinned Repositories

ELATUS
Language:R31
GeNNius
GeNNius: An ultrafast drug-target interaction inference method based on graph neural networks
Language:Python82
GraphEmb
Language:Python6 2 02
GUEST
This is a package for evaluating prediction models based on Graph Embedding methodologies.
Language:Jupyter Notebook9 2 00
manuscript_scRNAseq_lncRNAs
Repository containing all the scripts necessary for generating the results in the manuscript
Language:R22
MDS_5q_2023
Code of paper: Single-cell transcriptional profile of CD34+ hematopoietic progenitor cells from del(5q) myelodysplastic syndromes and impact of lenalidomide
Language:R22
SENA
Official repository for the SENA-discrepancy-VAE model.
Language:Python10
Sweetwater
Official repository of the data-driven deconvolution approach Sweetwater.
Language:Python110
transfer_example
LEts gooo
20
TraRe
This repository contains the TraRe package, from the paper "Bayesian Machine Learning Enables Identification of Transcriptional Network Disruptions Associated with Drug-Resistant Prostate Cancer"
Language:R4 3 00

ML4BM-Lab's Repositories

ML4BM-Lab/Sweetwater
Official repository of the data-driven deconvolution approach Sweetwater.
Language:Python110
ML4BM-Lab/GUEST
This is a package for evaluating prediction models based on Graph Embedding methodologies.
Language:Jupyter Notebook9 2 00
ML4BM-Lab/GeNNius
GeNNius: An ultrafast drug-target interaction inference method based on graph neural networks
Language:Python82
ML4BM-Lab/GraphEmb
Language:Python6 2 02
ML4BM-Lab/TraRe
This repository contains the TraRe package, from the paper "Bayesian Machine Learning Enables Identification of Transcriptional Network Disruptions Associated with Drug-Resistant Prostate Cancer"
Language:R4 3 00
ML4BM-Lab/ELATUS
Language:R31
ML4BM-Lab/manuscript_scRNAseq_lncRNAs
Repository containing all the scripts necessary for generating the results in the manuscript
Language:R22
ML4BM-Lab/MDS_5q_2023
Code of paper: Single-cell transcriptional profile of CD34+ hematopoietic progenitor cells from del(5q) myelodysplastic syndromes and impact of lenalidomide
Language:R22
ML4BM-Lab/transfer_example
LEts gooo
20
ML4BM-Lab/SENA
Official repository for the SENA-discrepancy-VAE model.
Language:Python10
ML4BM-Lab/TraRe-materials
Material for the reproducibility of figures and tables from TraRe project.
Language:HTML10
ML4BM-Lab/DeepRBP
Language:Jupyter Notebook2
ML4BM-Lab/JIND
1
ML4BM-Lab/JIND-Multi
An extended framework to leverage multiple labeled datasets for the automatic annotation of single-cell RNA and ATAC data
Language:Jupyter Notebook
ML4BM-Lab/NetActivityTrain
Nextflow pipeline to train models for NetActivity