Initial set-up for standalone MendelVar usage.
mendelvar_intial_setup.md
Manual changes required (see the "Populate OMIM data" section in the mendelvar_intial_setup.md file)
Default location to clone the repository with MendelVar scripts into: $HOME/bin/mendelvar_standalone
Make sure that two default locations below exist:
Default location for MendelVar data: $HOME/MendelVar
Default location for MendelVar results: $HOME/MendelVar_out
Script with MendelVar database updates.
sh ./user_input/2_mendelvar_regular_update.sh
Manual changes required (see lines 13, 30, 33 in the script)
Script for runs of standalone MendelVar jobs.
sh ./user_input/1_run_user_input.sh
Manual changes required (see line 15 in the script)
MendelVar tutorial
https://www.notion.so/MendelVar-tutorial-ab91d2a6acb846f2b9f2978fcd942dd5