Pinned Repositories
ott
ecosystem-packages
Registry for scverse ecosystem packages (https://scverse.org/packages/#ecosystem)
MUCDK
Config files for my GitHub profile.
ott
Optimal Transport tools implemented with the JAX framework, to get auto-diff, parallel and jit-able computations.
pprof
pprof is a tool for visualization and analysis of profiling data
scanpy
Single-cell analysis in Python. Scales to >1M cells.
squidpy_notebooks
Tutorials for Squidpy
ott
Optimal transport tools implemented with the JAX framework, to get differentiable, parallel and jit-able computations.
pertpy
Perturbation Analysis in the scverse ecosystem.
signac
R toolkit for the analysis of single-cell chromatin data
MUCDK's Repositories
MUCDK/ecosystem-packages
Registry for scverse ecosystem packages (https://scverse.org/packages/#ecosystem)
MUCDK/MUCDK
Config files for my GitHub profile.
MUCDK/ott
Optimal Transport tools implemented with the JAX framework, to get auto-diff, parallel and jit-able computations.
MUCDK/pprof
pprof is a tool for visualization and analysis of profiling data
MUCDK/scanpy
Single-cell analysis in Python. Scales to >1M cells.
MUCDK/squidpy_notebooks
Tutorials for Squidpy