/MathepiaPrograms

Resources about projects on mathematical biology.

Primary LanguageJavaScriptMIT LicenseMIT

MathepiaPrograms

Focusing on mathematical biology projects and sharing references and ideas on concerned projects.

See MathepiaPrograms Websites

Guides on contribution

  • Step One: Setup a personal github account
  • Step Two: Fork the repo
  • Step Three: Make revisions on your forked repo
  • Step Four: Submit a pull request

Project Template: (Complex Network as an example)

Document name is "Main_TopicName.md"

  • Problems

    (你们项目组私密的项目不要放在这)

    人口扩散网络的结构对传染病空间传播的影响

  • Experts in this area

    靳帧老师

    公众号:集智俱乐部

  • Reviews in this area

    陈关荣:探讨复杂网络的高阶拓扑及其应用

  • Books

    [1]靳帧, 孙桂全, 刘茂省. 网络传染病动力学建模与分析[M]. 科学出版社, 2014.

    [2]Newman M. Networks[M]. Oxford university press, 2018.

  • Open Source Software

  • References

    2020:

    Antelmi A, Cordasco G, Kamiński B, et al. Analyzing, exploring, and visualizing complex networks via hypergraphs using SimpleHypergraphs. jl[J]. arXiv preprint arXiv:2002.04654, 2020.

    can also be some zotero links.

  • Blogs

  • Others Resources

Other useful tools may help:

  • Use "Zotero" "Group" to share references links

  • Use Chrome addon "TabCopy" to generate quick url link of markdown

  • Use Chrome addon "markdown-clipper" to turn webpage to markdown document

Resources Link

Basic Theory

Dynamical System: Semigroup Theory and so on

Spectral Theory

Optimization, Optimal Control, Optimal Transport

Bayesian Theory

Graph Theory

Scientific Computation Methods

ODESDEDDE

Ordinary Differential Equation: Bifurcation

Stochastic Differential Equation

Delayed Differential Equation

Discontionous: Impulsive or Filippov System

PDE

Spatial Heterogeneity

Travelling Wave

Free Boundary

Nonlocal

Periodic System

Structure System: age-structure

Networks

Complex Networks

briatte/awesome-network-analysis: A curated list of awesome network analysis resources.

Evolution

Evolution

Machine Learning

Couple differential equation and deep learning

Multiscale Modelling

Agent Based Model

Within Host Dynamics

Specific Disease Modelling: HIV, Influenza, Covid19,Dengue, Zika, Ebola, Cancer, and so on

Precise Epidemic Control

Human Behaviours: mask, media impact, social distancing

Isolation Tracing Testing

Lockdown, transport control

Vaccination

Host Control: vector-borned disease

Health Resources

Economics

Paper Writings

English Writings

Contributors

生物自组织网络

景双林

Famous Groups and Organizations

Covid-19 | CMMID Repository