Mathlida

Mathlida's Stars

• google-deepmind/alphafold3

  AlphaFold 3 inference pipeline.

  Language:Python5.8k688

• rasbt/LLMs-from-scratch

  Implement a ChatGPT-like LLM in PyTorch from scratch, step by step

  Language:Jupyter Notebook37.3k4.8k

• naklecha/llama3-from-scratch

  llama3 implementation one matrix multiplication at a time

  Language:Jupyter Notebook14k1.1k

• Kensuke-Hinata/statistic

  collecting books, papers and docs.

  2.5k1.2k

• lucidrains/imagen-pytorch

  Implementation of Imagen, Google's Text-to-Image Neural Network, in Pytorch

  Language:Python8.1k774

• lucidrains/DALLE2-pytorch

  Implementation of DALL-E 2, OpenAI's updated text-to-image synthesis neural network, in Pytorch

  Language:Python11.2k1.1k

• baker-laboratory/RoseTTAFold-All-Atom

  Language:Python674121

• RosettaCommons/RFdiffusion

  Code for running RFdiffusion

  Language:Python1.9k363

• DessimozLab/read2tree

  a tool for inferring species tree from sequencing reads

  Language:Python14718

• flatironinstitute/DeepFRI

  Deep functional residue identification

  Language:Python31180

• drorlab/gvp-pytorch

  Geometric Vector Perceptrons --- a rotation-equivariant GNN for learning from biomolecular structure

  Language:Python25550

• drorlab/gvp

  Geometric Vector Perceptron --- a rotation-equivariant GNN for learning from biomolecular structure

  Language:Python13133

• LBM-EPFL/PeSTo

  Geometric deep learning method to predict protein binding interfaces from a protein structure.

  Language:Jupyter Notebook11317

• UKPLab/sentence-transformers

  State-of-the-Art Text Embeddings

  Language:Python15.7k2.5k

• FreyrS/dMaSIF

  Language:Jupyter Notebook19745

• Chen-Cai-OSU/awesome-equivariant-network

  Paper list for equivariant neural network

  1k102

• RosettaCommons/RoseTTAFold

  This package contains deep learning models and related scripts for RoseTTAFold

  Language:Python2.1k443

• google-deepmind/alphafold

  Open source code for AlphaFold 2.

  Language:Python13.1k2.3k

• TingsongYu/PyTorch_Tutorial

  《Pytorch模型训练实用教程》中配套代码

  Language:Python7.6k1.7k

• deepchem/deepchem

  Democratizing Deep-Learning for Drug Discovery, Quantum Chemistry, Materials Science and Biology

  Language:Python5.6k1.7k

• realbigws/LIG_Tool

  Extract ligands from original PDB file

  Language:C++94

• brain-research/mpnn

  Open source implementation of "Neural Message Passing for Quantum Chemistry"

  Language:Python23554

• tkipf/gcn

  Implementation of Graph Convolutional Networks in TensorFlow

  Language:Python7.2k2k

• insilicomedicine/GENTRL

  Generative Tensorial Reinforcement Learning (GENTRL) model

  Language:Python612218

• molecularsets/moses

  Molecular Sets (MOSES): A Benchmarking Platform for Molecular Generation Models

  Language:Python851244