Pinned Repositories
circular-d3
This is a project, a frankenstein, of circos svgs and d3, to make interactive visualizations that highlight the data with a tooltip
curam
A AUR package for system maintenance.
fastqparserjs
A streamable Fastq file parser
kmer.js
A simple library for shredding strings into their substrings. Guaranteed to produce all n - k + 1 substrings.
kmerdb
Python bioinformatics CLI for k-mer counts and de Bruijn graphs
ngs-ci
suffix_tree
This is the python module suffix_tree v2.1, python bindings for a C implementation of Generalized Suffix Trees. http://www.daimi.au.dk/~mailund/suffix_tree.html
MatthewRalston's Repositories
MatthewRalston/circular-d3
This is a project, a frankenstein, of circos svgs and d3, to make interactive visualizations that highlight the data with a tooltip
MatthewRalston/NGS_scripts
MatthewRalston/maplots
MatthewRalston/MS-Thesis
This repository includes tex and pdf files for a project for UD.
MatthewRalston/mynewstuff
MatthewRalston/Promoter_prediction
Prediction of transcription factor binding sites (TFBSs) in genomic sequences
MatthewRalston/Railstest
MatthewRalston/Server_configurations
This includes my .bash_profile for my current work on biohen.
MatthewRalston/tango_final
Alignment-free analysis of mycobacteriophage genomes
MatthewRalston/three_d
MatthewRalston/transrate
Quality assessment and comparison of transcriptome assemblies
MatthewRalston/udel-collab
software carpentry workshop. this is an example of how to collaborate.
MatthewRalston/UDsc_9_12