Pinned Repositories
circular-d3
This is a project, a frankenstein, of circos svgs and d3, to make interactive visualizations that highlight the data with a tooltip
curam
A AUR package for system maintenance.
fastqparserjs
A streamable Fastq file parser
kmer.js
A simple library for shredding strings into their substrings. Guaranteed to produce all n - k + 1 substrings.
kmerdb
Python bioinformatics CLI for k-mer counts and de Bruijn graphs
ngs-ci
suffix_tree
This is the python module suffix_tree v2.1, python bindings for a C implementation of Generalized Suffix Trees. http://www.daimi.au.dk/~mailund/suffix_tree.html
MatthewRalston's Repositories
MatthewRalston/kmerdb
Python bioinformatics CLI for k-mer counts and de Bruijn graphs
MatthewRalston/fastqparserjs
A streamable Fastq file parser
MatthewRalston/curam
A AUR package for system maintenance.
MatthewRalston/kmer.js
A simple library for shredding strings into their substrings. Guaranteed to produce all n - k + 1 substrings.
MatthewRalston/ngs-ci
MatthewRalston/.emacs.d
Just my emacs .el files.
MatthewRalston/Apollo-11
Original Apollo 11 Guidance Computer (AGC) source code for the command and lunar modules.
MatthewRalston/biogcc
Bioinformatics GC-counter written in Rust
MatthewRalston/conky
My personal conky config
MatthewRalston/docker-graphite-statsd
Docker image for Graphite & Statsd
MatthewRalston/documentation-theme-jekyll
A Jekyll-based theme designed for documentation and help systems. See the link for detailed instructions on setting up and configuring everything.
MatthewRalston/dotfiles
A collection of configs, dotfiles, etc. Copy only what you need. Should work across multiple target platforms.
MatthewRalston/ecopy
Python tools for ecological data analyses
MatthewRalston/galaxy-blastvisu
Visualisation for Blast XML outputs under Galaxy
MatthewRalston/INBRE_MCA_workshop
MatthewRalston/Jellyfish
A fast multi-threaded k-mer counter
MatthewRalston/jsonschema
An(other) implementation of JSON Schema for Python
MatthewRalston/kdb_rust
kmerdb PyPI module rewritten in Rust
MatthewRalston/kPAL
Analysis toolkit and programming library for k-mer profiles
MatthewRalston/Local_configurations
Includes .bash_profile, .emacs.d
MatthewRalston/MatthewRalston.github.io
My personal website using foundation
MatthewRalston/msa
Modular BioJS compoment for a multiple sequence alignment
MatthewRalston/node-hashtable
Native hashtable interface for when V8 objects can't take the heat
MatthewRalston/old
Old website, might revert
MatthewRalston/OpenDota2Data
A general purpose script for retrieving all matches and match info from Dota2's The International competition
MatthewRalston/sphinx-doc.el
Generate Sphinx friendly docstrings for Python functions in Emacs
MatthewRalston/Template_scripts
This repository contains template configuration and script files for several different languages.
MatthewRalston/vulnedock
Proof of concept for vulnerability management of Docker containers
MatthewRalston/Wallpaper_rotator
A conky config and wallpaper setter for cinnamon desktops
MatthewRalston/website.old