MetaboHUB-MetaToul-FluxoMet/RTMet

Issues

• Implement optional housekeeping

  #17 opened 3 months ago by elliotfontaine
  1

• Replace InfluxDB by an embedded per-run SQLite database

  #53 opened 2 months ago by elliotfontaine
  0

• Have conda environments directly in workflow source/runs directories

  #52 opened 2 months ago by elliotfontaine
  0

• A bash install script for quick install of the project

  #35 opened 3 months ago by elliotfontaine
  1

• Conda environments are not validated for packages presence and versions

  #47 opened 2 months ago by elliotfontaine
  0

• Write a development guide

  #31 opened 2 months ago by elliotfontaine
  0

• Show ads to other FluxoMet's projects in docs

  #45 opened 2 months ago by elliotfontaine
  0

• Replace homemade annotation script with W4M's `lcmsmatching`

  #12 opened 4 months ago by elliotfontaine
  1

• Write user guides

  #30 opened 2 months ago by elliotfontaine
  0

• Build an InfluxDB template for metabolite monitoring

  #40 opened 3 months ago by elliotfontaine
  0

• Auto-detect or remove the `spectrometer_id` config option

  #18 opened 3 months ago by elliotfontaine
  0

• Trimmed mzml loses its metadata (instrument, etc)

  #37 opened 3 months ago by elliotfontaine
  0

• Implement end-to-end testing of the workflow

  #29 opened 3 months ago by elliotfontaine
  0

• influx cli is an unlisted dependency

  #24 opened 3 months ago by elliotfontaine
  0

• Peaks near the border of a bin are split

  #11 opened 4 months ago by elliotfontaine
  0

• BinneR crashes when only one scan is selected

  #8 opened 4 months ago by elliotfontaine
  2

• Setup github actions

  #33 opened 3 months ago by elliotfontaine
  0

• Add spelling and hyperlink checks in documentation

  #32 opened 3 months ago by elliotfontaine
  0

• Add tests for homemade tasks

  #28 opened 3 months ago by elliotfontaine
  0

• Validate user config

  #10 opened 3 months ago by elliotfontaine
  0

• BinneR doesn't correctly detect the injection scans range

  #15 opened 3 months ago by elliotfontaine
  1

• Allow user to chose the window of scans to keep (binneR)

  #16 opened 3 months ago by elliotfontaine
  0

• PDF/LaTeX build of the documentation fails

  #22 opened 3 months ago by elliotfontaine
  0

• Make the workflow work with an InfluxDB Cloud instance

  #14 opened 3 months ago by elliotfontaine
  0

• Add hovering tooltips for glossary terms in doc

  #19 opened 3 months ago by elliotfontaine
  0

• Adding binneR to conda-forge for easier installation

  #9 opened 4 months ago by elliotfontaine
  0