Pinned Repositories
assembly_stats
Calculates both scaffold and contig statistics (N50, L50, etc.) from a scaffold FASTA file.
bhl_flickr_search
An app to search images from the Biodiversity Heritage Library Flickr account
covid-streamlit
A COVID risk assessment model app built using Streamlit
CSVConf2021_siopenaccess
Slides for CSV Conf 2021 Presentation
custom_blast_db
Utilities for making a versioned custom blast database
fantasy_sport_data
A place to put Jupyter notebooks showing my fantasy baseball/football draft prep.
genetic_collections
A Python library for connecting and comparing genetic records with specimen data.
siopenaccess
Example notebook showing how to interact with SI Open Access on AWS
MikeTrizna's Repositories
MikeTrizna/genetic_collections
A Python library for connecting and comparing genetic records with specimen data.
MikeTrizna/biocode_fims
A Python client for accessing data from the Biocode FIMS database.
MikeTrizna/mikes_recipes
Mike's recipes
MikeTrizna/recipes
A collection of my cooking recipes
MikeTrizna/2023-05-25-ttt-online-NASA-TOPS
Workshop website for May 25 and 26 2023 Carpentries Instructor Training
MikeTrizna/boarding
onboarding and offboarding info for the Data Science Lab
MikeTrizna/bold_blast_hydra
A collection of examples and documents for blasting barcodes on Hydra
MikeTrizna/carpentries-incubator.org
MikeTrizna/cldt_demo
a description
MikeTrizna/cldt_demo2
MikeTrizna/curriculum-advisors
Meeting notes and other documents related to curriculum advisory committees for Data Carpentry lessons.
MikeTrizna/dataset-cards
MikeTrizna/eht-imaging
Imaging, analysis, and simulation software for radio interferometry
MikeTrizna/git-intro
Introduction to version control with Git.
MikeTrizna/github-without-command-line
Collaborating and sharing using GitHub without command line. (A JupyterBook fork of the CodeRefinery workshop)
MikeTrizna/jkan_test
A lightweight, backend-free open data portal, powered by Jekyll
MikeTrizna/just_a_test
MikeTrizna/lc_openrefine_example
A demo of how GitHub can be used with OpenRefine
MikeTrizna/multiple_pages_example
An example of how to set up multiple github pages in 1 repo
MikeTrizna/ols7
Project repository for the Open Life Science cohort 7
MikeTrizna/outro_quarto
Testing out using RStudio Quarto to build Carpentries outro slides
MikeTrizna/python-ecology-lesson-alt
Python lesson based on Data Management with SQL for Ecologists
MikeTrizna/recipe
Carpentries demo of GitHub for sharing a recipe
MikeTrizna/recipe-1
Carpentries demo, favorite happy hour hot chocolate
MikeTrizna/recipe-2
A collection of my cooking recipes
MikeTrizna/recipe-3
a test recipe repo for the Carpentries GitHub workshop
MikeTrizna/recipe-october
A test recipe repository for GitHub workshop
MikeTrizna/recipes-1
collection of my cooking recipes
MikeTrizna/st-annotated-text
A simple component to display annotated text in Streamlit apps.
MikeTrizna/workshop-slides
Slides for workshop introductions, wrap-ups, and content.