Pinned Repositories
cluster
ISODATA clustering in R
encore
An extension to the MDAnalysis library providing support for dealing with structural ensembles. There is currently support for calculating covariance matrices, ensemble similarities, entropy and conducting PCA analyses.
MelBioInf_docs
Melbourne Bioinformatics documentation in markdown format
Model-of-heart-rate-performance
A model with multiple metabolic pathways to describe the performance curves with metabolic depression of marine molluscs.
mxfold2
MXfold2: RNA secondary structure prediction using deep learning with thermodynamic integration
RNA-editing-from-RNAseq
A shell pipeline for RNA-editing site identification from RNA-seq data only
rnafold-public
Analysis of RNA folding bias (Local Folding Energy) based on randomizations
rnafold-rts-public
Source code for RTS analysis. https://www.biorxiv.org/content/10.1101/2020.02.10.941153v1
SPOT-RNA
RNA Secondary Structure Prediction using an Ensemble of Two-dimensional Deep Neural Networks and Transfer Learning.
Thermal-adaptation-of-mRNA-secondary-structure
Ming-lingLIAO's Repositories
Ming-lingLIAO/rnafold-rts-public
Source code for RTS analysis. https://www.biorxiv.org/content/10.1101/2020.02.10.941153v1
Ming-lingLIAO/cluster
ISODATA clustering in R
Ming-lingLIAO/encore
An extension to the MDAnalysis library providing support for dealing with structural ensembles. There is currently support for calculating covariance matrices, ensemble similarities, entropy and conducting PCA analyses.
Ming-lingLIAO/MelBioInf_docs
Melbourne Bioinformatics documentation in markdown format
Ming-lingLIAO/Model-of-heart-rate-performance
A model with multiple metabolic pathways to describe the performance curves with metabolic depression of marine molluscs.
Ming-lingLIAO/RNA-editing-from-RNAseq
A shell pipeline for RNA-editing site identification from RNA-seq data only
Ming-lingLIAO/rnafold-public
Analysis of RNA folding bias (Local Folding Energy) based on randomizations
Ming-lingLIAO/Thermal-adaptation-of-mRNA-secondary-structure
Ming-lingLIAO/toolset
MMTSB Tool Set