/Genotype-phenotype-association-using-NLP-

Relation extraction between genotype and phenotype using named entity recognition and co-occurance

Primary LanguageJupyter Notebook

Genotype-phenotype-association-using-NLP

The aim of this project is to extract relation between genotype and phenotype. Firstly ,we need to identify the biological named entity of interest i.e tag the gene from the articles. Then,we need to find the co-occurrence between the entities i.e genotype and the phenotype

Model pipeline

flowchart

Result

newplot (5) newplot (6) newplot (7)