MonicaCabreraP

MonicaCabreraP's Stars

• haiyang-yun/3D_chromatin_in_AML

  code release for paper

  Language:R41

• hemberg-lab/scRNA.seq.course

  Analysis of single cell RNA-seq data course

  Language:TeX673359

• nf-core/cutandrun

  Analysis pipeline for CUT&RUN and CUT&TAG experiments that includes QC, support for spike-ins, IgG controls, peak calling and downstream analysis.

  Language:Nextflow8148

• ay-lab/dcHiC

  dcHiC: Differential compartment analysis for Hi-C datasets

  Language:R6210

• loosolab/TOBIAS

  Transcription factor Occupancy prediction By Investigation of ATAC-seq Signal

  Language:Python19841

• ManchesterBioinference/IntegratingATAC-RNA-HiC

  scripts for the integrating ATAC-seq, RNA-seq and CHi-C paper

  Language:Jupyter Notebook232

• nf-core/chipseq

  ChIP-seq peak-calling, QC and differential analysis pipeline.

  Language:Nextflow195150

• jishanshaikh4/tech101

  Technical Interviews 101: Free 10 days crash course for a complete interview preparation

  15

• jishanshaikh4/interview-test

  Mock test your programming/language skills by level (easy, medium, hard)

  16

• jishanshaikh4/Python-Interview-Bible-English

  Python Interviews Bible 2021 - English Edition

  82

• jishanshaikh4/everything-linux

  Scripts, tutorials, and solutions for everyday linux usage

  212

• jishanshaikh4/data-science-learning

  (FORK) Becoming better at DATA SCIENCE every day

  105

• jishanshaikh4/python_interview_questions_en

  Python Interview Questions - English Edition

  72

• ParkerLab/atactk

  A toolkit for working with ATAC-seq data.

  Language:Python244

• ENCODE-DCC/rna-seq-pipeline

  Language:Python14162

• sib-swiss/training-collection

  Collection of bioinformatics training materials

  Language:Python983182

• IARCbioinfo/integration_analysis_scripts

  Scripts for multi-omics integration

  Language:R46

• nboley/idr

  IDR

  Language:Python16846

• mireia-bioinfo/Single-cell-RNA-seq-data-analysis-2018

  Event page: https://www.csc.fi/web/training/-/single-cell-rnaseq-r-2018

  1

• mireia-bioinfo/howto-thesis-bookdown

  How to survive writting your PhD thesis using R and {bookdown}.

  Language:JavaScript2

• mireia-bioinfo/pipelineNGS

  Pipeline for processing epigenomic NGS data.

  Language:R42

• jekyller/PanelCV

  Panel CV for designers (or engineers) :)

  Language:HTML183413

• junlulocky/MLCheatsheet

  A 2-page machine learning cheatsheet - focus on mathematical formula

  Language:TeX2

• junlulocky/PythonTricks

  Python tricks and tips

  Language:Python3

• mireia-bioinfo/workshop_bioinfo_ChIPseq

  🖥️🧬 Materials for a Bioinformatics Workshop on ChIP-seq analysis, introduction to R and GenomicRanges.

  Language:HTML1

• jmonroynieto/bioinfo_advice

  Compiled list of advice from twitter thread.

  85

• ncborcherding/scRepertoire

  A toolkit for single-cell immune profiling

  Language:R31154

• MarionPerrier/scMLV

  Single-Cell Multilayer visualization tool

  Language:JavaScript3

• seandavi/awesome-single-cell

  Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.

  3.2k989

• upsetjs/upsetjs_jupyter_widget

  😠 Jupyter Widget bindings for UpSet.js for rendering UpSet plots, Euler, and Venn Diagrams

  Language:Python141