Myung-gyoLee

Myung-gyoLee's Stars

• quadbio/RNAseq_tutorial

  157

• dnanexus/UKB_RAP

  Access share reviewed code & Jupyter Notebooks for use on the UK Biobank (UKBB) Research Application Platform. Includes resources from DNAnexus webinars, online trainings and workshops.

  Language:Jupyter Notebook13448

• netneurolab/pypyls

  A Python implementation of Partial Least Squares (PLS) decomposition

  Language:Python6029

• mahynski/pychemauth

  Chemometric analysis methods implemented in python

  Language:Python91

• EBjerrum/Deep-Chemometrics

  Using deep learning approaches and convolutional neural networks (CNN) for spectroscopical data (deep chemometrics)

  Language:Jupyter Notebook7218

• KaleabTessera/Research-Paper-Reading-Template

  A markdown template for taking notes to summarize research papers.

  6724

• epam/NGB

  New Genome Browser (NGB) - a Web - based NGS data viewer with unique Structural Variations (SVs) visualization capabilities, high performance, scalability, and cloud data support

  Language:Java16141

• theislab/single-cell-best-practices

  https://www.sc-best-practices.org

  Language:Jupyter Notebook789189

• dariober/bioinformatics-cafe

  Unsorted scripts for bioinformatics

  Language:Python6025

• haniffalab/HCA_skin

  HCA data analysis

  Language:Jupyter Notebook163

• IanevskiAleksandr/sc-type

  Language:HTML24247

• hawn-lab/workshops_UW_Seattle

  Language:HTML2420

• BCCHR-trainee-omics-group/StudyGroup

  This is where TOG houses all of its workshop scripts, as well as details on its upcoming workshops and seminars.

  Language:HTML4129

• cytoscape/RCy3

  New version of RCy3, redesigned and collaboratively maintained by Cytoscape developer community

  Language:R5220

• mbourgey/EBI_cancer_workshop_visualization

  EBI cancer workshop course materials

  Language:Shell209

• lindsayrutter/VisualizationMethods

  Scripts to reproduce figures in differential expression visualization paper

  Language:R918

• shuibingchen/SARS_COV2

  Identification of SARS-CoV-2 Inhibitors using Lung and Colonic Organoids

  Language:R2

• OmnesRes/onco_lnc

  Language:Python3416

• raivokolde/pheatmap

  Pretty heatmaps

  Language:R23983

• thorplab/Macrophage-Efferocytosis-Single-Cell

  Single-Cell RNA Sequencing Distinguishes Heterogenous Transcriptional Signatures in Macrophages during Efferocytosis

  Language:R62

• satijalab/seurat

  R toolkit for single cell genomics

  Language:R2.3k920

• satijalab/sctransform

  R package for modeling single cell UMI expression data using regularized negative binomial regression

  Language:R21433

• lindawangg/COVID-Net

  COVID-Net Open Source Initiative

  Language:Jupyter Notebook1.1k478

• davidnboone/tcga_brca_rnaseq

  jupyter notebook; perform differential gene expression analysis using DESeq2 on TCGA RNAseq data

  Language:Jupyter Notebook2916

• mforde84/RNAseq-Survival-Analysis-TCGA-KIRC

  Language:HTML1114

• calico/solo

  software to detect doublets

  Language:Python8613

• GuangchuangYu/enrichment4GTEx_clusterProfiler

  reproduce the functional enrichment analysis presented in GTEx paper using clusterProfiler/DOSE

  3316

• jolars/eulerr

  Area-Proportional Euler and Venn Diagrams with Ellipses

  Language:R13118

• datergram/visual

  이전 스터디 파트 1 ~ 4

  Language:HTML611

• hbctraining/In-depth-NGS-Data-Analysis-Course

  Language:HTML438269