/gdc-tosvc-tools

Tools for GDC Tumor-only Somatic Variant Calling Workflow

Primary LanguagePythonApache License 2.0Apache-2.0

gdc-tosvc-tools

Tools for GDC Tumor-only Somatic Variant Calling Workflow

Installation

pip install .

Development

  • Clone this repository
  • Requirements:
    • Python >= 3.8
    • Tox
  • make venv to create a virtualenv
  • source .venv/bin/activate to activate new virtualenv
  • make init to install dependencies and pre-commit hooks