Genomic Data Commons

Pinned Repositories

gdc-client
GDC Data Transfer Tool
Language:Python143 40 043
gdc-dnaseq-cwl
CWL for GDC DNASeq workflows
Language:Common Workflow Language20 21 014
gdc-docs
Official repository for GDC User Guides in Markdown format
Language:JavaScript58 18 019
gdc-frontend-framework
Language:TypeScript9 15 00
gdc-maf-tool
Language:Python7 17 02
gdc-workflow-overview
Overview of GDC Harmonization Workflows
27 14 010
gdcdatamodel
Translation layer between the GDC Data Dictionary and psqlgraph
Language:Python28 36 03
gdcdictionary
Data dictionary for the GDC
Language:Python50 43 1137
portal-ui
GDC Data Portal UI
Language:JavaScript18 19 010
psqlgraph
Library for graph-like storage in postgresql using sqlalchemy
Language:Python21 32 06

Genomic Data Commons's Repositories

NCI-GDC/gdc-client
GDC Data Transfer Tool
Language:Python143 40 043
NCI-GDC/gdc-docs
Official repository for GDC User Guides in Markdown format
Language:JavaScript58 18 019
NCI-GDC/gdcdictionary
Data dictionary for the GDC
Language:Python50 43 1137
NCI-GDC/gdcdatamodel
Translation layer between the GDC Data Dictionary and psqlgraph
Language:Python28 36 03
NCI-GDC/psqlgraph
Library for graph-like storage in postgresql using sqlalchemy
Language:Python21 32 06
NCI-GDC/gdc-dnaseq-cwl
CWL for GDC DNASeq workflows
Language:Common Workflow Language20 21 014
NCI-GDC/portal-ui
GDC Data Portal UI
Language:JavaScript18 19 010
NCI-GDC/gdc-frontend-framework
Language:TypeScript9 15 00
NCI-GDC/gdc-maf-tool
Language:Python7 17 02
NCI-GDC/maf-lib
Python package for processing and creating MAF files for the GDC
Language:Python6 9 103
NCI-GDC/aliquot-maf-tools
Tools for creating and filtering aliquot-level MAFs
Language:Python4 10 22
NCI-GDC/gdc-models
Git repository centrally stores and serves GDC data models defined in static YAML files
Language:Python3 21 01
NCI-GDC/indexd
Index service server
Language:Python3 19 00
NCI-GDC/aliquot-level-maf
Language:Python2 15 01
NCI-GDC/gdc-ng-models
Language:Python2 25 01
NCI-GDC/gdc-rnaseq-cwl
GDC RNA-Seq STAR 2-Pass Workflow
Language:Common Workflow Language2 13 08
NCI-GDC/cdisutils
Utility modules for GDC functionality
Language:Python1 29 02
NCI-GDC/sesame-cwl
GDC Methylation Array Workflow
Language:Common Workflow Language1 17 0
NCI-GDC/variant-filtration-cwl
Workflows for filtering GDC VCFs
Language:Common Workflow Language1 11 02
NCI-GDC/boxplot
Language:JavaScript0 1 00
NCI-GDC/gatk4-mutect2-tool
Language:Python0 10 00
NCI-GDC/vep-cwl
GDC VEP Variant Annotation Workflow
Language:Common Workflow Language0 10 03
NCI-GDC/aliquot-maf-cwl
CWL tools and workflows for generating and processing aliquot-MAF
Language:Common Workflow Language10 02
NCI-GDC/django
The Web framework for perfectionists with deadlines.
Language:Python1 0
NCI-GDC/gatk4_mutect2_cwl
Language:Common Workflow Language12 0
NCI-GDC/gdc-tosvc-tools
Tools for GDC Tumor-only Somatic Variant Calling Workflow
Language:Python10 01
NCI-GDC/gdc_tosvc_workflow
GDC Tumor-only Somatic Variant Calling Workflow
Language:Common Workflow Language10 0
NCI-GDC/indexclient
Prototype index service client.
Language:Python20 0
NCI-GDC/samtools-mpileup-cwl
CWL for GDC samtools mpileup
Language:Common Workflow Language10 01
NCI-GDC/samtools-mpileup-tool
GDC samtools mpileup tool docker
Language:Python10 01