Genomic Data Commons

Pinned Repositories

gdc-client
GDC Data Transfer Tool
Language:Python147 39 040
gdc-dnaseq-cwl
CWL for GDC DNASeq workflows
Language:Common Workflow Language22 21 013
gdc-docs
Official repository for GDC User Guides in Markdown format
Language:JavaScript60 18 019
gdc-frontend-framework
Language:TypeScript10 15 00
gdc-workflow-overview
Overview of GDC Harmonization Workflows
27 14 09
gdcdatamodel
Translation layer between the GDC Data Dictionary and psqlgraph
Language:Python28 35 03
gdcdictionary
Data dictionary for the GDC
Language:Python50 43 1137
maf-lib
Python package for processing and creating MAF files for the GDC
Language:Python8 9 103
portal-ui
GDC Data Portal UI
Language:JavaScript18 19 010
psqlgraph
Library for graph-like storage in postgresql using sqlalchemy
Language:Python21 31 06

Genomic Data Commons's Repositories

NCI-GDC/gdc-client
GDC Data Transfer Tool
Language:Python147 39 040
NCI-GDC/gdc-docs
Official repository for GDC User Guides in Markdown format
Language:JavaScript60 18 019
NCI-GDC/gdcdictionary
Data dictionary for the GDC
Language:Python50 43 1137
NCI-GDC/gdcdatamodel
Translation layer between the GDC Data Dictionary and psqlgraph
Language:Python28 35 03
NCI-GDC/gdc-dnaseq-cwl
CWL for GDC DNASeq workflows
Language:Common Workflow Language22 21 013
NCI-GDC/psqlgraph
Library for graph-like storage in postgresql using sqlalchemy
Language:Python21 31 06
NCI-GDC/portal-ui
GDC Data Portal UI
Language:JavaScript18 19 010
NCI-GDC/gdc-frontend-framework
Language:TypeScript10 15 00
NCI-GDC/aliquot-maf-tools
Tools for creating and filtering aliquot-level MAFs
Language:Python4 10 22
NCI-GDC/gdc-models
Git repository centrally stores and serves GDC data models defined in static YAML files
Language:Python3 20 01
NCI-GDC/indexd
Index service server
Language:Python3 18 00
NCI-GDC/gdc-ng-models
Language:Python2 24 01
NCI-GDC/cdisutils
Utility modules for GDC functionality
Language:Python1 28 02
NCI-GDC/variant-filtration-cwl
Workflows for filtering GDC VCFs
Language:Common Workflow Language1 11 02
NCI-GDC/variant-filtration-tool
Support tools for the GDC Variant Filtration Workflow
Language:Python1 10 02
NCI-GDC/boxplot
Language:JavaScript0 1 00
NCI-GDC/gatk4-mutect2-tool
Language:Python0 10 00
NCI-GDC/gdc-sanger-somatic-tool
Support scripts for the sanger somatic workflows
Language:Python0 10 01
NCI-GDC/qqplot
Language:JavaScript00
NCI-GDC/vep-cwl
GDC VEP Variant Annotation Workflow
Language:Common Workflow Language0 10 03
NCI-GDC/bio-colors
Language:JavaScript6 01
NCI-GDC/django
The Web framework for perfectionists with deadlines.
Language:Python1 0
NCI-GDC/gatk4_mutect2_cwl
Language:Common Workflow Language12 0
NCI-GDC/gdc-tosvc-tools
Tools for GDC Tumor-only Somatic Variant Calling Workflow
Language:Python9 01
NCI-GDC/gdc_tosvc_workflow
GDC Tumor-only Somatic Variant Calling Workflow
Language:Common Workflow Language10 0
NCI-GDC/indexclient
Prototype index service client.
Language:Python19 0
NCI-GDC/samtools-mpileup-cwl
CWL for GDC samtools mpileup
Language:Common Workflow Language9 01
NCI-GDC/samtools-mpileup-tool
GDC samtools mpileup tool docker
Language:Python13 01
NCI-GDC/survivalplot
Language:JavaScript
NCI-GDC/webdev_wfui-react
UI library used by the main GDC site
Language:JavaScript