Can you run nextDenovo without a config file?
JWDebler opened this issue · 1 comments
JWDebler commented
Question or Expected behavior
Is it possible to run nextDenovo without a config file and instead supply all the options as via the command line?
I want to automate assemblies as much as possible and therefore prefer to supply options via commandline flags instead of generating config and fofn files.
Cheers
Operating system
Ubuntu 18.04.6 LTS
NextDenovo
2.5.2
moold commented
No, for the current version. But, we are working on NextDenovo2 that can accept options via commandline.