NicholasClark
Biostatistics, bioinformatics, machine learning, etc. at @labsyspharm @sorgerlab
Harvard Medical SchoolBoston
NicholasClark's Stars
CompVis/stable-diffusion
A latent text-to-image diffusion model
google/jax
Composable transformations of Python+NumPy programs: differentiate, vectorize, JIT to GPU/TPU, and more
tinygrad/tinygrad
You like pytorch? You like micrograd? You love tinygrad! ❤️
karpathy/micrograd
A tiny scalar-valued autograd engine and a neural net library on top of it with PyTorch-like API
jonkrohn/ML-foundations
Machine Learning Foundations: Linear Algebra, Calculus, Statistics & Computer Science
gcorso/DiffDock
Implementation of DiffDock: Diffusion Steps, Twists, and Turns for Molecular Docking
Chen-Cai-OSU/awesome-equivariant-network
Paper list for equivariant neural network
e3nn/e3nn
A modular framework for neural networks with Euclidean symmetry
HeliXonProtein/OmegaFold
OmegaFold Release Code
ehoogeboom/e3_diffusion_for_molecules
QUVA-Lab/escnn
Equivariant Steerable CNNs Library for Pytorch https://quva-lab.github.io/escnn/
microsoft/molecule-generation
Implementation of MoLeR: a generative model of molecular graphs which supports scaffold-constrained generation
crazyhottommy/The-world-of-faculty
resources for faculty
dglai/Graph-Neural-Networks-in-Life-Sciences
zjost/blog_code
A repo for holding example code
Oloren-AI/olorenchemengine
OCE is the first infinitely composable library for reproducibly implementing SOTA molecular property prediction/QSAR techniques.
delalamo/af2_conformations
A series of scripts that facilitate the prediction of protein structures in multiple conformations using AlphaFold2
Rose-STL-Lab/LIMO
generative model for drug discovery
uhlerlab/cross-modal-autoencoders
cmbi/dssp
The DSSP building software
gitter-lab/pria_lifechem
Virtual screening on PriA-SSB and RMI-FANCM with the LifeChem library
Oloren-AI/OCE-TDC
ashbellett/deep-learning
Implementations of deep learning algorithms.
gdrplatform/gDRimport
gDRimport - The R package is a part of the gDR suite with helper for prepare raw drug response data for downstream processing.
gdrplatform/gDRstyle
gDRstyle - R package with style requirements for the gDR suite
ArtemSokolov/devenv
Personal developer environments
ArtemSokolov/ord-work
Workspace for ordinalRidge
gdrplatform/gDRcore
R package to process dose-response curve data with the GR methods
gdrplatform/gDRtestData
gDRtestData - R data package with testing dose-response data
labsyspharm/kinome-website