OSCA-source/OSCA.multisample

Issues

• Various Approaches to Independent Filtering

  #19 opened 2 months ago by DarioS
  1

• Change of default `legacy` in `edgeR::glmQLFit()` with edgeR v4.0.7 changes results in cluster-abundance.Rmd

  #16 opened a year ago by PeteHaitch
  4

• Failure to compile pijuan-embryo.Rmd in BioC 3.18

  #12 opened a year ago by PeteHaitch
  3

• Question about order of operation in generating pseudo bulk data for differential expression

  #11 opened a year ago by holgerman
  2

• typo

  #10 opened 2 years ago by rgentlem
  1

• Changes to TSCAN breaking book in 3.16

  #9 opened 2 years ago by PeteHaitch
  2

• This chapter not found

  #7 opened 2 years ago by lindsaynhayes
  1

• Differential abundance analysis

  #5 opened 2 years ago by IrSoler
  2

• Recent change to igraph::cluster_louvain() also breaks section "9.5 Combined analyses"

  #8 opened 3 years ago by hpages
  1

• '"CD3D" %in% head(demo$Symbol) is not TRUE' error in BioC 3.14, 3.15, and 3.16

  #6 opened 3 years ago by hpages
  5