Pinned Repositories
deepmaps
Single-cell biological network inference using a heterogeneous graph transformer
DESSO
A DL-based framework for sequence and shape motif identification in the human genome
IRIS
A Shiny web server for interactive visualization and analysis of RNA-seq data
IRIS3
IRIS3: Integrated Cell-type-specific Regulon Inference Server from Single-cell RNA-Seq (https://bmbl.bmi.osumc.edu/iris3/)
marsgt
Multi-omics data analysis for rare population inference using single-cell graph transformer
QUBIC2
A novel biclustering algorithm for analyses of transcriptomic data.
scDEAL
Deep Transfer Learning of Drug Sensitivity by Integrating Bulk and Single-cell RNA-seq data
scGNN2.0
scread-protocol
ssread
A single-cell and spatial RNA-seq database for Alzheimer’s Disease
OSU_BMBL's Repositories
OSU-BMBL/QUBIC2
A novel biclustering algorithm for analyses of transcriptomic data.
OSU-BMBL/CeRIS
Cell-type-specific Regulon Inference from Single-cell RNA-Seq
OSU-BMBL/metaqubic
A biclustering-based package for metagenomic and metatranscriptomic data
OSU-BMBL/BMI8050-2020
OSU-BMBL/PGRP-Grape-Grafting
Adapting Perennial Crops for Climate Change: Graft Transmissible Effects of Rootstocks on Grapevine Shoots
OSU-BMBL/GOST
OSU-BMBL/UberOperon
OSU-BMBL/BoBro2
OSU-BMBL/BRIC
OSU-BMBL/CancerPhylogeneticModel
A phylogenetic model for understanding the effect of-gene duplication on cancer progression
OSU-BMBL/GeneQC
Gene expression level Quality Control
OSU-BMBL/PromotePredictor
A sigma-54 promoter predictor in prokaryotic genomes based on a machine learning method
OSU-BMBL/QUBIC
A qualitative biclustering algorithm for analyses of gene expression data
OSU-BMBL/QUBIC-R-Package
QUBIC R Package
OSU-BMBL/rSeqTU
A machine learning based R package for identification of bacterial transcriptional units
OSU-BMBL/scRNAseq-template
OSU-BMBL/Supercoil
Bacterial chromosome folding structure under different conditions