Pinned Repositories
BGEN.jl
MendelIHT.jl
Iterative hard thresholding for l0 penalized regression
MendelImpute.jl
OpenMendel package for haplotyping and imputation
MendelPlots.jl
Julia package for plotting results from GWAS
OpenMendel.github.io
The main website for the OpenMendel project.
OrdinalGWAS.jl
Genome-wide association studies (GWAS) for ordered categorical phenotypes
OrdinalMultinomialModels.jl
ordered multinomial models
SnpArrays.jl
Compressed storage for SNP data
TrajGWAS.jl
VCFTools.jl
Julia utilities for handling VCF files
OpenMendel's Repositories
OpenMendel/SnpArrays.jl
Compressed storage for SNP data
OpenMendel/MendelImpute.jl
OpenMendel package for haplotyping and imputation
OpenMendel/MendelIHT.jl
Iterative hard thresholding for l0 penalized regression
OpenMendel/OrdinalGWAS.jl
Genome-wide association studies (GWAS) for ordered categorical phenotypes
OpenMendel/VCFTools.jl
Julia utilities for handling VCF files
OpenMendel/OpenMendel.github.io
The main website for the OpenMendel project.
OpenMendel/OrdinalMultinomialModels.jl
ordered multinomial models
OpenMendel/TrajGWAS.jl
OpenMendel/BGEN.jl
OpenMendel/MendelPlots.jl
Julia package for plotting results from GWAS
OpenMendel/Tutorials
Basic OpenMendel tutorials
OpenMendel/VarianceComponentModels.jl
Utilities for fitting and testing variance component models
OpenMendel/WiSER.jl
Within-subject variance estimation by robust regression (WiSER)
OpenMendel/ASHG-OpenMendelWorkshop-2020-Oct
OpenMendel tutorials for ASHG Workshop
OpenMendel/ADMIXTURE.jl
Julia wrapper of the ADMIXTURE program for estimating ancestry
OpenMendel/OpenADMIXTURE.jl
OpenMendel/LangeSymposium-ProgrammingWorkshop-20202022
OpenMendel tutorials for Lange's Symposium Programming Workshop
OpenMendel/MendelBase.jl
MendelBase contains the base functions of OpenMendel.
OpenMendel/MendelGWAS.jl
This package performs standard Genome-wide Association Studies.
OpenMendel/PGENFiles.jl
OpenMendel/TraitSimulation.jl
Simulate phenotypes from any GLM model
OpenMendel/ClassicMendel
Official Mendel package distribution
OpenMendel/GeneticVariantBase.jl
OpenMendel/HaploADMIXTURE.jl
OpenMendel/MendelGeneticCounseling.jl
This analysis option performs risk calculations for genetic counseling problems.
OpenMendel/MendelLocationScores.jl
This analysis option maps a trait via the method of Location Scores, i.e., multipoint linkage analysis.
OpenMendel/MendelSearch.jl
MendelSearch is a program for function optimization. Search permits bounds and linear constraints to be imposed on parameters and, in statistical applications, computes asymptotic standard errors and correlations of parameter estimates.
OpenMendel/MendelTwoPointLinkage.jl
This analysis option performs two-point linkage analysis.
OpenMendel/MendelKinship.jl
This analysis option computes kinship and other identity coefficients.
OpenMendel/QuasiCopula.jl
A Flexible Quasi-Copula Distribution for Statistical Modeling