OpenSourceBrain

Pinned Repositories

AllenInstituteNeuroML
Example files to test interaction between models developed at the Allen Brain Institute and NeuroML
Language:HTML17 11 1810
BlueBrainProjectShowcase
A project to illustrate how models and data from the Blue Brain Project can be converted to NeuroML and PyNN
Language:AGS Script25 13 718
Contribute
A central repository for issues listing OSB projects looking for contributors
4 12 151
IzhikevichModel
GitHub repository for an OSB project for model from http://izhikevich.org/publications/whichmod.htm
Language:Jupyter Notebook26 8 814
OpenCortex
A framework for building cortical network models on OSB
Language:Python11 10 15
osb-model-validation
Tools for automated model validation in OpenSourceBrain projects
Language:XSLT9 6 5110
OSB_Documentation
Source repository for documentation at Open Source Brain
23 7 111
OSBv2
An updated version of the Open Source Brain platform
Language:Python12 9 5966
Thalamocortical
GitHub repository for an OSB project containing a thalamocortical network model based on Traub et al. 2005
Language:XSLT9 6 712
WilsonCowan
Wilson–Cowan model
Language:Jupyter Notebook14 6 32

OpenSourceBrain's Repositories

OpenSourceBrain/OSBv2
An updated version of the Open Source Brain platform
Language:Python12 9 5966
OpenSourceBrain/OpenCortex
A framework for building cortical network models on OSB
Language:Python11 10 15
OpenSourceBrain/osb-model-validation
Tools for automated model validation in OpenSourceBrain projects
Language:XSLT9 6 5110
OpenSourceBrain/L5bPyrCellHayEtAl2011
Layer 5b Pyramidal cell - Hay et al. 2011
Language:AGS Script6 6 32
OpenSourceBrain/CelegansNeuromechanicalGaitModulation
C. elegans neuromechanical gait modulation model from Boyle, Berri and Cohen 2012
Language:C5 4 17
OpenSourceBrain/PotjansDiesmann2014
Large scale model of cortical network from Potjans and Diesmann, 2014
Language:Python5 10 57
OpenSourceBrain/Brunel2000
Sparsely connected spiking neuron network from Brunel 2000
Language:Python4 6 12
OpenSourceBrain/PyNNShowcase
A repository for testing interactions/conversions between NeuroML & PyNN
Language:Python4 5 01
OpenSourceBrain/DANDIArchiveShowcase
Scripts for interacting with the DANDI Archive
Language:Python3 5 95
OpenSourceBrain/EDENShowcase
Repository for testing EDEN simulator with NeuroML, OSB, notebooks, etc.
Language:Python3 5 0
OpenSourceBrain/NetPyNEShowcase
NetPyNE & NeuroML interactions
Language:Python3 6 22
OpenSourceBrain/GranuleCell
GitHub repository for an OSB project containing a cerebellar granule cell based on Maex & De Schutter 1998
Language:XSLT2 4 02
OpenSourceBrain/pynsgr
Python interface to the NeuroScience Gateway REST interface, based on pycipres
Language:Python2 5 53
OpenSourceBrain/BrianShowcase
A testbed for interactions between Brian and NeuroML2/LEMS
Language:Python1 6 0
OpenSourceBrain/HindmarshRose1984
HindmarshRose 1984 cell model
Language:Python1 6 11
OpenSourceBrain/NESTShowcase
Mapping NeuroML2/LEMS to NEST
Language:Python1 6 01
OpenSourceBrain/NEURONShowcase
Examples of how to convert NEURON to & from NeuroML
Language:AMPL1 8 22
OpenSourceBrain/PsyNeuLinkShowcase
Interactions between PsyNeuLink and NeuroML2/LEMS
Language:Python1
OpenSourceBrain/SBMLShowcase
OSB showcase of interactions between SBML and NeuroML
Language:Python1 6 422
OpenSourceBrain/StochasticityShowcase
A repository for neuronal models containing stocastic elements (e.g. input currents, syanpses, ion channels) in various formats
Language:Jupyter Notebook1 6 33
OpenSourceBrain/2016218
A model of rodent mechanoreceptors (LTMRs) (Medlock et al., 2024)
OpenSourceBrain/2018009
Synchronization in a realistic model of CA1 pyramidal neurons (Fiasconaro and Migliore 2024)
OpenSourceBrain/2018021
Disinhibitory circuit for arousal effects in perceptual decision making tasks (Beerendonk et al., 2024)
OpenSourceBrain/243446
Voltage- and Branch-specific Climbing Fiber Responses in Purkinje Cells (Zang et al 2018)
Language:NMODL1 01
OpenSourceBrain/262670
Locust olfactory network with GGN and full KC population in the mushroom body (Ray et al 2020)
Language:Python1 12
OpenSourceBrain/ArborShowcase
Examples of Arbor<->NeuroML
Language:Jupyter Notebook6 0
OpenSourceBrain/MOOSEShowcase
Showcase project illustrating interactions between MOOSE & NeuroML
Language:Python8 1
OpenSourceBrain/NeuroMLSBMLShowcase
Models combining elements specified in NeuroML and SBML
Language:Jupyter Notebook
OpenSourceBrain/OSB_homepage
OSB homepage
Language:HTML8 18
OpenSourceBrain/XPPShowcase
Showcase of XPP(AUT) models interacting with NeuroML2/LEMS
4 0