OtakuZerg

OtakuZerg's Stars

• PATRIC3/mic_prediction

  Code for doing MIC predictions on genomes

  Language:Python363

• exo-explore/exo

  Run your own AI cluster at home with everyday devices 📱💻 🖥️⌚

  Language:Python17.8k975

• bactopia/bactopia

  A flexible pipeline for complete analysis of bacterial genomes

  Language:Nextflow42373

• ISUgenomics/bioinformatics-workbook

  Bioinformatics Workbook repository

  Language:HTML17790

• mgalardini/pyseer

  SEER, reimplemented in python 🐍🔮

  Language:Python11327

• klebgenomics/Kleborate

  Language:Python11849

• katholt/srst2

  Short Read Sequence Typing for Bacterial Pathogens

  Language:Python12566

• caitiecollins/treeWAS

  treeWAS: A Phylogenetic Tree-Based Tool for Genome-Wide Association Studies in Microbes

  Language:R9619

• OtakuZerg/EpiModel

  Mathematical Modeling of Infectious Disease Dynamics

  1

• OtakuZerg/Smith_etal_Enterococcus

  C. difficile metabolic modeling in co-culture with E. faecalis

  1