Files are generously hosted by Amazon Web Services. Although available as straight-forward HTTP links, download performance is improved by using the Amazon Web Services command-line interface. References should be amended to use the s3://
addressing scheme, i.e. replace http://s3.amazon.com/nanopore-human-wgs/
with s3://nanopore-human-wgs
to download. For example, to download rel3-nanopore-wgs-288418386-FAB39088
to the current working directory use the following command.
aws s3 cp s3://nanopore-human-wgs/rel3-nanopore-wgs-288418386-FAB39088.fastq.gz .
Amending the max_concurrent_requests
etc. settings as per this guide will improve download performance further.
Please raise issues on this Github repository concerning this dataset.
* rel1: 1st December 2016. Initial release.
* rel2: 5th December 2016. 25 flowcells, 58958035887 bases, 9053909 reads
* rel3: 39 flowcells, 91240120433 bases, 14183584 reads
* rel4: added additional 14 flowcells, 23140190547 bases, 1415868 reads
* RNA release: 30th November 2016. 30 flowcells (direct RNA), 12 flowcells (1D cDNA)