Pinned Repositories
Perugolate's Repositories
Perugolate/dotfiles
Perugolate/10.1128-AAC.48.10.3670-3676.2004
Perugolate/academicons
Perugolate/applied-computational-genomics
Applied Computational Genomics Course at UU: Spring 2020
Perugolate/assembly_workshop
Perugolate/BacGWASim
A Simulator for Bacterial Machine learning and Genome-Wide Association Studies
Perugolate/BI-BE-CS-183-2023
Introduction to Computational Biology and Bioinformatics Course at Caltech, 2023
Perugolate/clinPK
Equations and tools for clinical pharmacokinetics
Perugolate/cloud-span-theme
Cloud-Span Web Style Theme
Perugolate/configs
Config files used to define parameters specific to compute environments at different Institutions
Perugolate/DrosEU_pipeline
Bioinformatics pipeline for the generation and analysis of the DrosEU data of 2014.
Perugolate/FriendsDontLetFriends
Friends don't let friends make certain types of data visualization - What are they and why are they bad.
Perugolate/grayscale-theme
Jekyll theme based on Grayscale Start Bootstrap theme
Perugolate/guppy_on_slurm
Splitting and accelerating the Oxford Nanopore basecaller guppy using CPU with the SLURM job scheduler
Perugolate/gwas
Course materials for "Genome Wide Association Studies (GWAS)"
Perugolate/hpc
Perugolate/legacy_ct_modelling
Modelling individual-level viral kinetics using data from the LEGACY study
Perugolate/natcomms-musyc2021
Perugolate/notebooks
Our World In Data jupyter notebooks
Perugolate/optimizing-bottlenecks
Maximizing the rate of microbial adaptation under population bottlenecks, using both analytical and simulation techniques
Perugolate/osx-keyboard-layout-german-no-deadkeys
A German OS X keyboard layout that eliminates deadkeys
Perugolate/PDfunction
scripts for reproducing figures
Perugolate/prj_example_data
Some data for use with examples
Perugolate/r-in-production
Perugolate/ResazurinMIC
upload data and analysis pipeline
Perugolate/rtl8812au
Realtek 802.11n WLAN Adapter Linux driver
Perugolate/smsk_trinotate
Snakemake workflow to run transdecoder + trinotate
Perugolate/snp-sites
Finds SNP sites from a multi-FASTA alignment file
Perugolate/tm
Perugolate/vimrc
:rocket: Messy and not so minimal .vimrc file for JavaScript, Go, Rust, and Svelte development