Perugolate's Stars
ODoSE/odose.nl
Ortholog Direction of Selection Engine
lh3/bioawk
BWK awk modified for biological data
datacarpentry/archive-datacarpentry
Data Carpentry workshop materials
aaren/notedown
Markdown <=> IPython Notebook
jgm/pandoc
Universal markup converter
SchlossLab/ipython-mothurmagic
IPython extension for running mothur commands in an IPython notebook
naupaka/esa_data_viz_2014
ESA 2014, Data Visualization in R workshop
dnasko/CASC
CASC Ain't Simply CRT
sachsmc/tufterhandout
Output formats for Tufte-style handouts in pdf and html for Rmarkdown
jaseg/matelight
Show text and gifs on mate crates. Uses C code orchestrated from Python via ctypes.
harelba/q
q - Run SQL directly on delimited files and multi-file sqlite databases
tidyverse/magrittr
Improve the readability of R code with the pipe
jupyter/colaboratory
[deprecated] Jupyter CoLaboratory, goto google colab now
s16h/py-must-watch
Must-watch videos about Python
kahun/awesome-sysadmin
A curated list of amazingly awesome open source sysadmin resources inspired by Awesome PHP.
wcaleb/pandoc-templates
Templates for pandoc
blahah/assemblotron
Automated optimisation of de-novo transcriptome assembly
konradjk/loftee
rasbt/algorithms_in_ipython_notebooks
A repository with IPython notebooks of algorithms implemented in Python.
rothos/lexitron
A command-line regex search engine for the English language.
zulily/ipy_alerts
pysam-developers/pysam
Pysam is a Python package for reading, manipulating, and writing genomics data such as SAM/BAM/CRAM and VCF/BCF files. It's a lightweight wrapper of the HTSlib API, the same one that powers samtools, bcftools, and tabix.
olgabot/prettyplotlib
Painlessly create beautiful matplotlib plots.
bioprojects/orderedPainting
jdupl/youtube-dl-channel
This utility allows you to download all the playlists and/or videos from a channel on Youtube.
ksahlin/GetDistr
Calculates distribution of observed fragment sizes (or insert sizes) in various scenarios for structural variant calling or genome assembly
dib-lab/khmer
In-memory nucleotide sequence k-mer counting, filtering, graph traversal and more
KorfLab/CEGMA_v2
The final version 2 release of our software to detect core genes in eukaryotic genomes
sahands/python-by-example
Git repository for the "Python Language Features and Tricks You May Not Know Article" at http://sahandsaba.com/thirty-python-language-features-and-tricks-you-may-not-know.html
vmirly/DataScience